Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is ilvB [H]
Identifier: 21226772
GI number: 21226772
Start: 803011
End: 804705
Strand: Reverse
Name: ilvB [H]
Synonym: MM_0670
Alternate gene names: 21226772
Gene position: 804705-803011 (Counterclockwise)
Preceding gene: 21226773
Following gene: 21226771
Centisome position: 19.64
GC content: 49.44
Gene sequence:
>1695_bases ATGACAACCGGGTCAACAGACAAAGTCAACGGCGCAAAGGCTCTTATAAAGTGCCTCGAAAAAGAAGGAGTTGACACTCT CTTCGGATACCCCGGAGGGCAGATCATTCCTTTCTACAATGAACTCTATGATTCAGATCTTCGCCACATACTTGTACGCC ACGAACAGGCAGCTGCTCATGCTGCGGACGGGTACGCCCGTGCTACTGGAAAAACCGGGGTCTGCGTATCCACTTCAGGT CCCGGAGCAACCAACCTGGTAACAGGTATTGCTACTGCATACATGGATTCTGTGCCGATTGTAGCATTAACCGGCCAGGT GCCGAGGTCCCTTATCGGAAACGATGCTTTCCAGGAAGCGGATATTACAGGCATTACCATGCCGATTACCAAGCACAACT ATCTCGTACAGGATCCGCAAGAAATCCCGAGGATTGTAAAAGAAGCCTTCCACATAGCGTCTACCGGAAGGCCTGGCCCG GTATTAATTGATCTCCCGAAGGATGTACAGAATATAGAGATTGACTTACACTATCCTGAGAGGGTAGAGCTCAGGGGCTA TAAGCCTACTTATAAAGGAAACACTCAGCAGATTAAACGAGCCGCTGAAGAGATTGCAAACTCCTGCAGGCCTATAATCT ACGCAGGTGGCGGAGTGATAAGTTCCAATGCAAGTGCAGAGCTTGTTGAGTTTGCCGAAACTATCAAGGCTCCCGTCACA ACCACACTTATGGGTATAAGTTCTATCCCGACTGAACATCCCCTGTATGTCGGAATGCTGGGGATGCACGGGTGTAAGTA CGCAAACTATGCGATTCAGGAATCCGACCTGATTATTGCTGTGGGAGCAAGATTTGACGACCGTGTTACCGGCAAACTCG AATCCTTTGCCCCCAACGCCAGAGTTATTCATATTGATGTTGACCCTGCAGAGATTTCCAAGAATGTAAAGGTACATATC CCCATTGTCGGGGATGCAAAACAGGTTCTCAAATCCCTGATCAGATATGTCCAGTGCTGCAGGTCAGCAGAATGGATTGA AAAGGTAAACCTGTGGAAGAAAGAATATCCTCTCAACTACAGGGAGTGCAGGGATACTATAATGCCCCAATTTGTTATCG AACAGATCTCCGAAGTCTGCAGGGATGCAATTATAGTTACCGAGGTCGGACAGCACCAGATGTGGGCTGCCCAGTTCTTC AAATACAGCAAACCCAGGACTTTCCTCACTTCTGGCGGACTCGGCACAATGGGATACGGGTTCCCGGCAGCCATGGGGGC CAAGGTGGGCAGGCCGGACAAAACCGTTATCAATATCGCAGGGGACGGCTCTTTCCAGATGAACTCCCAGGAGCTTGCAA CTGTGGTCCAGAACGATATCCCTGTTGTTTCCGTGATCCTGAACAACGGCTATCTGGGCATGGTCAGGCAGTGGCAGGAA CTCTTCTATGACAGGAGGTATTCCTACACATTCATTAAAGGCAGTGTTGACTTTGTAAAGCTTGCTGAAGCCTATGGAGC CCTTGGACTTCGTGCAGAGAGGCCGTCTGAAGTCAGGCCTGCAATCGAAGAGGCTGTTAATTCCGGAAGGCCGACAGTTG TTGAAGTTATTGTCGAGTGCGAGGCAAATGTTTATCCAATGGTTCCGGCAGGGGCTGCAATTAATGAGATCATTGACCTG GAGGAACACAGATGA
Upstream 100 bases:
>100_bases AATATAGTATTTCTTATTACACACCCTGACTGGAAAGGCTCACCTGTAATGTGAGCGCCCAGCCGGACAAAATCTCAAGA AATAAGTAAGGAGATAAATA
Downstream 100 bases:
>100_bases AACATACACTTGCAGTCCTTGTGGAAAATAAGTCGGGTGTGCTCTCCAGAGTTGCTTCTCTCTTTTCAAGGCGTGGATAC AATATCGACAGCCTTGCAGT
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MTTGSTDKVNGAKALIKCLEKEGVDTLFGYPGGQIIPFYNELYDSDLRHILVRHEQAAAHAADGYARATGKTGVCVSTSG PGATNLVTGIATAYMDSVPIVALTGQVPRSLIGNDAFQEADITGITMPITKHNYLVQDPQEIPRIVKEAFHIASTGRPGP VLIDLPKDVQNIEIDLHYPERVELRGYKPTYKGNTQQIKRAAEEIANSCRPIIYAGGGVISSNASAELVEFAETIKAPVT TTLMGISSIPTEHPLYVGMLGMHGCKYANYAIQESDLIIAVGARFDDRVTGKLESFAPNARVIHIDVDPAEISKNVKVHI PIVGDAKQVLKSLIRYVQCCRSAEWIEKVNLWKKEYPLNYRECRDTIMPQFVIEQISEVCRDAIIVTEVGQHQMWAAQFF KYSKPRTFLTSGGLGTMGYGFPAAMGAKVGRPDKTVINIAGDGSFQMNSQELATVVQNDIPVVSVILNNGYLGMVRQWQE LFYDRRYSYTFIKGSVDFVKLAEAYGALGLRAERPSEVRPAIEEAVNSGRPTVVEVIVECEANVYPMVPAGAAINEIIDL EEHR
Sequences:
>Translated_564_residues MTTGSTDKVNGAKALIKCLEKEGVDTLFGYPGGQIIPFYNELYDSDLRHILVRHEQAAAHAADGYARATGKTGVCVSTSG PGATNLVTGIATAYMDSVPIVALTGQVPRSLIGNDAFQEADITGITMPITKHNYLVQDPQEIPRIVKEAFHIASTGRPGP VLIDLPKDVQNIEIDLHYPERVELRGYKPTYKGNTQQIKRAAEEIANSCRPIIYAGGGVISSNASAELVEFAETIKAPVT TTLMGISSIPTEHPLYVGMLGMHGCKYANYAIQESDLIIAVGARFDDRVTGKLESFAPNARVIHIDVDPAEISKNVKVHI PIVGDAKQVLKSLIRYVQCCRSAEWIEKVNLWKKEYPLNYRECRDTIMPQFVIEQISEVCRDAIIVTEVGQHQMWAAQFF KYSKPRTFLTSGGLGTMGYGFPAAMGAKVGRPDKTVINIAGDGSFQMNSQELATVVQNDIPVVSVILNNGYLGMVRQWQE LFYDRRYSYTFIKGSVDFVKLAEAYGALGLRAERPSEVRPAIEEAVNSGRPTVVEVIVECEANVYPMVPAGAAINEIIDL EEHR >Mature_563_residues TTGSTDKVNGAKALIKCLEKEGVDTLFGYPGGQIIPFYNELYDSDLRHILVRHEQAAAHAADGYARATGKTGVCVSTSGP GATNLVTGIATAYMDSVPIVALTGQVPRSLIGNDAFQEADITGITMPITKHNYLVQDPQEIPRIVKEAFHIASTGRPGPV LIDLPKDVQNIEIDLHYPERVELRGYKPTYKGNTQQIKRAAEEIANSCRPIIYAGGGVISSNASAELVEFAETIKAPVTT TLMGISSIPTEHPLYVGMLGMHGCKYANYAIQESDLIIAVGARFDDRVTGKLESFAPNARVIHIDVDPAEISKNVKVHIP IVGDAKQVLKSLIRYVQCCRSAEWIEKVNLWKKEYPLNYRECRDTIMPQFVIEQISEVCRDAIIVTEVGQHQMWAAQFFK YSKPRTFLTSGGLGTMGYGFPAAMGAKVGRPDKTVINIAGDGSFQMNSQELATVVQNDIPVVSVILNNGYLGMVRQWQEL FYDRRYSYTFIKGSVDFVKLAEAYGALGLRAERPSEVRPAIEEAVNSGRPTVVEVIVECEANVYPMVPAGAAINEIIDLE EHR
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=569, Percent_Identity=24.9560632688928, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI21361361, Length=577, Percent_Identity=25.3032928942808, Blast_Score=159, Evalue=8e-39, Organism=Escherichia coli, GI87081685, Length=565, Percent_Identity=46.1946902654867, Blast_Score=543, Evalue=1e-155, Organism=Escherichia coli, GI1790104, Length=559, Percent_Identity=44.3649373881932, Blast_Score=495, Evalue=1e-141, Organism=Escherichia coli, GI1786717, Length=580, Percent_Identity=37.0689655172414, Blast_Score=373, Evalue=1e-104, Organism=Escherichia coli, GI1787096, Length=560, Percent_Identity=29.6428571428571, Blast_Score=221, Evalue=9e-59, Organism=Escherichia coli, GI1788716, Length=559, Percent_Identity=25.7602862254025, Blast_Score=176, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17531301, Length=569, Percent_Identity=26.3620386643234, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17531299, Length=569, Percent_Identity=26.3620386643234, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17542570, Length=601, Percent_Identity=23.1281198003328, Blast_Score=138, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6323755, Length=582, Percent_Identity=45.53264604811, Blast_Score=491, Evalue=1e-140, Organism=Saccharomyces cerevisiae, GI6321524, Length=524, Percent_Identity=26.5267175572519, Blast_Score=117, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6320816, Length=571, Percent_Identity=25.3940455341506, Blast_Score=111, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6323163, Length=537, Percent_Identity=24.7672253258845, Blast_Score=108, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6323073, Length=530, Percent_Identity=25.0943396226415, Blast_Score=100, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6320123, Length=491, Percent_Identity=24.0325865580448, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI19922626, Length=487, Percent_Identity=26.0780287474333, Blast_Score=159, Evalue=6e-39,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 61859; Mature: 61727
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGSTDKVNGAKALIKCLEKEGVDTLFGYPGGQIIPFYNELYDSDLRHILVRHEQAAAH CCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH AADGYARATGKTGVCVSTSGPGATNLVTGIATAYMDSVPIVALTGQVPRSLIGNDAFQEA HCCCHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCC DITGITMPITKHNYLVQDPQEIPRIVKEAFHIASTGRPGPVLIDLPKDVQNIEIDLHYPE CCCEEEEEEECCCCEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCC RVELRGYKPTYKGNTQQIKRAAEEIANSCRPIIYAGGGVISSNASAELVEFAETIKAPVT EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHHCCCHH TTLMGISSIPTEHPLYVGMLGMHGCKYANYAIQESDLIIAVGARFDDRVTGKLESFAPNA HHHHHHHCCCCCCCEEEEEHHCCCCCCCCCEEECCCEEEEECCCCCCCHHCCHHHCCCCC RVIHIDVDPAEISKNVKVHIPIVGDAKQVLKSLIRYVQCCRSAEWIEKVNLWKKEYPLNY EEEEEECCHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCH RECRDTIMPQFVIEQISEVCRDAIIVTEVGQHQMWAAQFFKYSKPRTFLTSGGLGTMGYG HHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCC FPAAMGAKVGRPDKTVINIAGDGSFQMNSQELATVVQNDIPVVSVILNNGYLGMVRQWQE CHHHHCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH LFYDRRYSYTFIKGSVDFVKLAEAYGALGLRAERPSEVRPAIEEAVNSGRPTVVEVIVEC HHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEC EANVYPMVPAGAAINEIIDLEEHR CCCEEECCCCCHHHHHHHHCCCCC >Mature Secondary Structure TTGSTDKVNGAKALIKCLEKEGVDTLFGYPGGQIIPFYNELYDSDLRHILVRHEQAAAH CCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH AADGYARATGKTGVCVSTSGPGATNLVTGIATAYMDSVPIVALTGQVPRSLIGNDAFQEA HCCCHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCC DITGITMPITKHNYLVQDPQEIPRIVKEAFHIASTGRPGPVLIDLPKDVQNIEIDLHYPE CCCEEEEEEECCCCEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCC RVELRGYKPTYKGNTQQIKRAAEEIANSCRPIIYAGGGVISSNASAELVEFAETIKAPVT EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHHCCCHH TTLMGISSIPTEHPLYVGMLGMHGCKYANYAIQESDLIIAVGARFDDRVTGKLESFAPNA HHHHHHHCCCCCCCEEEEEHHCCCCCCCCCEEECCCEEEEECCCCCCCHHCCHHHCCCCC RVIHIDVDPAEISKNVKVHIPIVGDAKQVLKSLIRYVQCCRSAEWIEKVNLWKKEYPLNY EEEEEECCHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCH RECRDTIMPQFVIEQISEVCRDAIIVTEVGQHQMWAAQFFKYSKPRTFLTSGGLGTMGYG HHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCC FPAAMGAKVGRPDKTVINIAGDGSFQMNSQELATVVQNDIPVVSVILNNGYLGMVRQWQE CHHHHCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH LFYDRRYSYTFIKGSVDFVKLAEAYGALGLRAERPSEVRPAIEEAVNSGRPTVVEVIVEC HHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEC EANVYPMVPAGAAINEIIDLEEHR CCCEEECCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]