| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is aegA [H]
Identifier: 21226766
GI number: 21226766
Start: 795363
End: 796772
Strand: Direct
Name: aegA [H]
Synonym: MM_0664
Alternate gene names: 21226766
Gene position: 795363-796772 (Clockwise)
Preceding gene: 21226765
Following gene: 21226768
Centisome position: 19.42
GC content: 52.27
Gene sequence:
>1410_bases ATGCAAGAATTACACGGAGAAAAGACAGGAAAAGCAAAGAAAGAGAGAACCCCAATGCCAGAGCAGCCTGCAGGGGAACG CAGGAAGAACTTCAATGAAGTTGCCCTCGGCTACACGAAAGAAGATGCCCTTGCAGAGGCTTCCAGGTGTCTTGCCTGCA AAGAACCGAAATGTGTTGAAGGCTGCCCTGTGAACGTGGATATTCCGGGATTTATTCAGCTTATATGTGAGGAGAATTTT GAAGGGGCAATTGAAAGGATTAAAGCCACAAACGCTCTCCCTGCAATCTGCGGCCGCGTCTGCCCTCAGGAAAGCCAGTG CGAAGCCCACTGTGTACTGGGGAAAAAGGGCCAGCCTGTTGCAATCGGAAGGCTTGAGCGTTTCTGTGCAGATTATGAGC GCGAAAAAGGTGTGAAGTCTCCACAGGTCATGCCGCCCACAGGCAAGAGGGTGGCAGTTGTAGGTTCCGGTCCTGCAGGA CTTACTGCCGCAGCAGACCTGGCAAAACTCGGGCACAAAGTAACAATCTTTGAGTCCCTGCACAAAGCCGGAGGAGTCCT GAGTTACGGCATCCCCGAGTTCAGGCTGCCAAAAGAAATTGTCCGGCAGGAAATCGAGTACATTGAAAAACTCGGTGTTG AGGTCAGGCCCAACTATATCATAGGCAGGATCAAGACTCTTGACGAATTATGTGACGATTTCGATGCCGTTTTCCTTGGA ACCGGGGCAGGGCTCCCGAGCTTCATGGGAATAGAGGGCGAAAACCTGAATGGCGTATATTCAGCTAACGAATTCCTGAC CCGGGTAAACCTCATGAAAGCCTATGACCCCGAATACGATACCACGGTCAGGCGCGGGAAGAATGTTGTGGTTGTAGGAG GCGGAAATGTGGCAATGGACGCAGCCCGCTCTGCTCTCCGCCTGGGCGCAGACGAGGTAAGCATAGTCTACCGCCGCGGA GAGGATGAGATGCCCGCCCGCCGTGAGGAGATCGAGCACGCCAAAGAAGAGGGCATTACTTTCAGGCTCCTTACAAACCC CGTACGCATCCTTGGTGACGAGAAGTTCAACGTCACAGGTGTCGAATGCATAAGGATGGAACTTGGCGAACCCGATAAAT CTGGCAGGAGAAGCCCTGTCCCTGTTGAAGGCTCGGAATTCCTTGTGCCGGCAGATGTTGTGGTTATTGCGATAGGCACC TCTCCAAACCCGATCATTTTTAAAGGCTCGGAAGGGCTTGAACAGAATAAGAGAGGAACTGTAGTTGCTGATGAGGAGAC CGGAGCGACCTCCAAATGTGGAGTCTTTGCCGGCGGAGACGTGGTTACAGGGGCAGCAACCGTTATCAGCGCAATGGGCG CAGGTAAGAAGGCTGCAAAAGCAATTGATGAATATTTGAAAGAAAAGTGA
Upstream 100 bases:
>100_bases GAACAGGCTTGCTATGTACCGCGGCGAAGAAACAGAAGCAACGGAAAAGTATGAAGAGAAATGCAGGTGCGGACTGCACT GAACTGGAGGGGAAGAAAAA
Downstream 100 bases:
>100_bases AACCAGAGAAATAAAGAAAAGTAGTAATGAAATAGCAGTGAGATAAAAGAAAGATGAAACTTCTTCATTTATTATTCTTT TATCTCAGTTTCTTTGTATT
Product: putative oxidoreductase
Products: L-glutamine; 2-oxoglutarate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MQELHGEKTGKAKKERTPMPEQPAGERRKNFNEVALGYTKEDALAEASRCLACKEPKCVEGCPVNVDIPGFIQLICEENF EGAIERIKATNALPAICGRVCPQESQCEAHCVLGKKGQPVAIGRLERFCADYEREKGVKSPQVMPPTGKRVAVVGSGPAG LTAAADLAKLGHKVTIFESLHKAGGVLSYGIPEFRLPKEIVRQEIEYIEKLGVEVRPNYIIGRIKTLDELCDDFDAVFLG TGAGLPSFMGIEGENLNGVYSANEFLTRVNLMKAYDPEYDTTVRRGKNVVVVGGGNVAMDAARSALRLGADEVSIVYRRG EDEMPARREEIEHAKEEGITFRLLTNPVRILGDEKFNVTGVECIRMELGEPDKSGRRSPVPVEGSEFLVPADVVVIAIGT SPNPIIFKGSEGLEQNKRGTVVADEETGATSKCGVFAGGDVVTGAATVISAMGAGKKAAKAIDEYLKEK
Sequences:
>Translated_469_residues MQELHGEKTGKAKKERTPMPEQPAGERRKNFNEVALGYTKEDALAEASRCLACKEPKCVEGCPVNVDIPGFIQLICEENF EGAIERIKATNALPAICGRVCPQESQCEAHCVLGKKGQPVAIGRLERFCADYEREKGVKSPQVMPPTGKRVAVVGSGPAG LTAAADLAKLGHKVTIFESLHKAGGVLSYGIPEFRLPKEIVRQEIEYIEKLGVEVRPNYIIGRIKTLDELCDDFDAVFLG TGAGLPSFMGIEGENLNGVYSANEFLTRVNLMKAYDPEYDTTVRRGKNVVVVGGGNVAMDAARSALRLGADEVSIVYRRG EDEMPARREEIEHAKEEGITFRLLTNPVRILGDEKFNVTGVECIRMELGEPDKSGRRSPVPVEGSEFLVPADVVVIAIGT SPNPIIFKGSEGLEQNKRGTVVADEETGATSKCGVFAGGDVVTGAATVISAMGAGKKAAKAIDEYLKEK >Mature_469_residues MQELHGEKTGKAKKERTPMPEQPAGERRKNFNEVALGYTKEDALAEASRCLACKEPKCVEGCPVNVDIPGFIQLICEENF EGAIERIKATNALPAICGRVCPQESQCEAHCVLGKKGQPVAIGRLERFCADYEREKGVKSPQVMPPTGKRVAVVGSGPAG LTAAADLAKLGHKVTIFESLHKAGGVLSYGIPEFRLPKEIVRQEIEYIEKLGVEVRPNYIIGRIKTLDELCDDFDAVFLG TGAGLPSFMGIEGENLNGVYSANEFLTRVNLMKAYDPEYDTTVRRGKNVVVVGGGNVAMDAARSALRLGADEVSIVYRRG EDEMPARREEIEHAKEEGITFRLLTNPVRILGDEKFNVTGVECIRMELGEPDKSGRRSPVPVEGSEFLVPADVVVIAIGT SPNPIIFKGSEGLEQNKRGTVVADEETGATSKCGVFAGGDVVTGAATVISAMGAGKKAAKAIDEYLKEK
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=473, Percent_Identity=32.9809725158562, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI237757300, Length=126, Percent_Identity=34.9206349206349, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1788811, Length=457, Percent_Identity=40.0437636761488, Blast_Score=318, Evalue=4e-88, Organism=Escherichia coli, GI1789606, Length=460, Percent_Identity=38.2608695652174, Blast_Score=315, Evalue=5e-87, Organism=Escherichia coli, GI87082180, Length=450, Percent_Identity=38.8888888888889, Blast_Score=291, Evalue=9e-80, Organism=Escherichia coli, GI1788468, Length=453, Percent_Identity=34.4370860927152, Blast_Score=231, Evalue=9e-62, Organism=Escherichia coli, GI1789243, Length=418, Percent_Identity=35.8851674641148, Blast_Score=209, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17570289, Length=493, Percent_Identity=29.0060851926978, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI71984108, Length=447, Percent_Identity=32.662192393736, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17543860, Length=159, Percent_Identity=35.8490566037736, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320030, Length=467, Percent_Identity=29.7644539614561, Blast_Score=200, Evalue=4e-52, Organism=Drosophila melanogaster, GI28574881, Length=478, Percent_Identity=32.0083682008368, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI24665539, Length=478, Percent_Identity=32.0083682008368, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI24665547, Length=478, Percent_Identity=32.0083682008368, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI24665543, Length=478, Percent_Identity=32.0083682008368, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI24640763, Length=442, Percent_Identity=32.8054298642534, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI18858217, Length=442, Percent_Identity=32.8054298642534, Blast_Score=185, Evalue=5e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: 1.4.1.13
Molecular weight: Translated: 50566; Mature: 50566
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQELHGEKTGKAKKERTPMPEQPAGERRKNFNEVALGYTKEDALAEASRCLACKEPKCVE CCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCHHEECCCCHHHHHHHHHHHCCCCCCCCC GCPVNVDIPGFIQLICEENFEGAIERIKATNALPAICGRVCPQESQCEAHCVLGKKGQPV CCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCCCCC AIGRLERFCADYEREKGVKSPQVMPPTGKRVAVVGSGPAGLTAAADLAKLGHKVTIFESL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEHHHHHH HKAGGVLSYGIPEFRLPKEIVRQEIEYIEKLGVEVRPNYIIGRIKTLDELCDDFDAVFLG HHHCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEECCCEEEHHHHHHHHHHCCCCEEEEE TGAGLPSFMGIEGENLNGVYSANEFLTRVNLMKAYDPEYDTTVRRGKNVVVVGGGNVAMD CCCCCCHHCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCHHHH AARSALRLGADEVSIVYRRGEDEMPARREEIEHAKEEGITFRLLTNPVRILGDEKFNVTG HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCHHEECCCCCCCCH VECIRMELGEPDKSGRRSPVPVEGSEFLVPADVVVIAIGTSPNPIIFKGSEGLEQNKRGT HEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCEEEECCCCCCCCCCCC VVADEETGATSKCGVFAGGDVVTGAATVISAMGAGKKAAKAIDEYLKEK EEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MQELHGEKTGKAKKERTPMPEQPAGERRKNFNEVALGYTKEDALAEASRCLACKEPKCVE CCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCHHEECCCCHHHHHHHHHHHCCCCCCCCC GCPVNVDIPGFIQLICEENFEGAIERIKATNALPAICGRVCPQESQCEAHCVLGKKGQPV CCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCCCCC AIGRLERFCADYEREKGVKSPQVMPPTGKRVAVVGSGPAGLTAAADLAKLGHKVTIFESL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEHHHHHH HKAGGVLSYGIPEFRLPKEIVRQEIEYIEKLGVEVRPNYIIGRIKTLDELCDDFDAVFLG HHHCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEECCCEEEHHHHHHHHHHCCCCEEEEE TGAGLPSFMGIEGENLNGVYSANEFLTRVNLMKAYDPEYDTTVRRGKNVVVVGGGNVAMD CCCCCCHHCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCHHHH AARSALRLGADEVSIVYRRGEDEMPARREEIEHAKEEGITFRLLTNPVRILGDEKFNVTG HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCHHEECCCCCCCCH VECIRMELGEPDKSGRRSPVPVEGSEFLVPADVVVIAIGTSPNPIIFKGSEGLEQNKRGT HEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCEEEECCCCCCCCCCCC VVADEETGATSKCGVFAGGDVVTGAATVISAMGAGKKAAKAIDEYLKEK EEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; NADP+
Specific reaction: 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]