| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is mshA [H]
Identifier: 21226752
GI number: 21226752
Start: 780497
End: 781558
Strand: Direct
Name: mshA [H]
Synonym: MM_0650
Alternate gene names: 21226752
Gene position: 780497-781558 (Clockwise)
Preceding gene: 21226751
Following gene: 21226757
Centisome position: 19.05
GC content: 33.33
Gene sequence:
>1062_bases ATGGAAATTGATTATATAAACGGCCTGAAAACGGACGAAATATTCGGGATGTCAAAATATCAAAGTGAAATCAATAGCAG GCTAGGGAACATCAAATTAAATAGGATTGAATATCCGGACATATCAAAGACACCTGGGGTTAATAAAATTGTTGAATACT TTGTATATCCATTCATTGTAAAGAAAGAAGTAACTAAGAATAACGTTAAACATGTGACCCGCCAGGATCTGGCGTTTCTT CTCGAGCTAATAGATTTAAAAAAAACAATTGTTACCTGCCATGATATTATACCTATTGCATACTATCATACCCAGAACCC CATATGGAAACTTAATGCAAAAGGATTGAGAAAAGCAGAAAAAATAATTACGGTATCCGAATTTTCTAAAAACGATATTA TTAAACATATAAGATATCCAGAAGATAAGATAGAGATTATACCTCCTGCTGTAAACCACAATTTATACTATCAAAATCGA AATAAGTCAATTTTGAAAAAGTATGGAATAAAAGAAGATGAGAAAGTAATCCTGTATGTCGGAGCGGAAGAACCAAGAAA AAATATTCAAGTTTTAATAAATTCATTCGATAAATTAAAAAGTAAAATTTCACAGATAAAATTATTGAAAGTCGGAACGC CAAATTACCTGGGAGTAAGAGAAAAACTTCTGAAACAAATAGAGTCCCTAAATTTACAGAAGGATGTTATCTTTGCAGGG TATGTGCCAGAGAGTGAATTAGCAAAAATATACAATGCTGTAGACTTATTTGTATTTCCATCTTTGTATGAGGGTTTTGG AATACCCCCTCTCGAAGCTATGGCTTGTGGGACCCCGGTAATAACATCAAACAGCTCTTCACTGCCTGAAGTTGTGGGAG ATGCTGCTATAATTATAGACCCATACGACGCAAATAAATTTGCTGAAAAAATGTATGAAGTGCTGATAAATGATGGATTG AAAGAAGAAATTGTCAGAAAGGGATTGAGAAGATCAAAAATGTTTAGCTGGGAAGATTCGGCAAGAAAAACGTTAAAAGT ATATAAAGAATTTCGGCCTTAA
Upstream 100 bases:
>100_bases AAAAAGAGTACATAAGGCAAAGTAATAAGACAAATCATAAATTGTTTAATTAAAAGTAACAATTTACAAAGTCATTCCTG AATTTTTGGGGAACTTAGAG
Downstream 100 bases:
>100_bases GTCAGAATTCCATCCCGAATCCCCTTTAAGAACGAAATAAAAGACGGCAGAATTTCTTTTCTTTTTTGACGGTATAAGAT GCCACCAATGATCATCCAGG
Product: mannosyltransferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MEIDYINGLKTDEIFGMSKYQSEINSRLGNIKLNRIEYPDISKTPGVNKIVEYFVYPFIVKKEVTKNNVKHVTRQDLAFL LELIDLKKTIVTCHDIIPIAYYHTQNPIWKLNAKGLRKAEKIITVSEFSKNDIIKHIRYPEDKIEIIPPAVNHNLYYQNR NKSILKKYGIKEDEKVILYVGAEEPRKNIQVLINSFDKLKSKISQIKLLKVGTPNYLGVREKLLKQIESLNLQKDVIFAG YVPESELAKIYNAVDLFVFPSLYEGFGIPPLEAMACGTPVITSNSSSLPEVVGDAAIIIDPYDANKFAEKMYEVLINDGL KEEIVRKGLRRSKMFSWEDSARKTLKVYKEFRP
Sequences:
>Translated_353_residues MEIDYINGLKTDEIFGMSKYQSEINSRLGNIKLNRIEYPDISKTPGVNKIVEYFVYPFIVKKEVTKNNVKHVTRQDLAFL LELIDLKKTIVTCHDIIPIAYYHTQNPIWKLNAKGLRKAEKIITVSEFSKNDIIKHIRYPEDKIEIIPPAVNHNLYYQNR NKSILKKYGIKEDEKVILYVGAEEPRKNIQVLINSFDKLKSKISQIKLLKVGTPNYLGVREKLLKQIESLNLQKDVIFAG YVPESELAKIYNAVDLFVFPSLYEGFGIPPLEAMACGTPVITSNSSSLPEVVGDAAIIIDPYDANKFAEKMYEVLINDGL KEEIVRKGLRRSKMFSWEDSARKTLKVYKEFRP >Mature_353_residues MEIDYINGLKTDEIFGMSKYQSEINSRLGNIKLNRIEYPDISKTPGVNKIVEYFVYPFIVKKEVTKNNVKHVTRQDLAFL LELIDLKKTIVTCHDIIPIAYYHTQNPIWKLNAKGLRKAEKIITVSEFSKNDIIKHIRYPEDKIEIIPPAVNHNLYYQNR NKSILKKYGIKEDEKVILYVGAEEPRKNIQVLINSFDKLKSKISQIKLLKVGTPNYLGVREKLLKQIESLNLQKDVIFAG YVPESELAKIYNAVDLFVFPSLYEGFGIPPLEAMACGTPVITSNSSSLPEVVGDAAIIIDPYDANKFAEKMYEVLINDGL KEEIVRKGLRRSKMFSWEDSARKTLKVYKEFRP
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790061, Length=230, Percent_Identity=26.5217391304348, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17532709, Length=239, Percent_Identity=23.4309623430962, Blast_Score=68, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI9755344, Length=268, Percent_Identity=24.6268656716418, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 40611; Mature: 40611
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIDYINGLKTDEIFGMSKYQSEINSRLGNIKLNRIEYPDISKTPGVNKIVEYFVYPFIV CCCCCCCCCCCHHHHCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH KKEVTKNNVKHVTRQDLAFLLELIDLKKTIVTCHDIIPIAYYHTQNPIWKLNAKGLRKAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECHHHHHHHH KIITVSEFSKNDIIKHIRYPEDKIEIIPPAVNHNLYYQNRNKSILKKYGIKEDEKVILYV HEEEHHHCCHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCHHHHHHCCCCCCCEEEEEE GAEEPRKNIQVLINSFDKLKSKISQIKLLKVGTPNYLGVREKLLKQIESLNLQKDVIFAG CCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEE YVPESELAKIYNAVDLFVFPSLYEGFGIPPLEAMACGTPVITSNSSSLPEVVGDAAIIID CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEECCCCCCHHHHCCEEEEEE PYDANKFAEKMYEVLINDGLKEEIVRKGLRRSKMFSWEDSARKTLKVYKEFRP CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MEIDYINGLKTDEIFGMSKYQSEINSRLGNIKLNRIEYPDISKTPGVNKIVEYFVYPFIV CCCCCCCCCCCHHHHCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH KKEVTKNNVKHVTRQDLAFLLELIDLKKTIVTCHDIIPIAYYHTQNPIWKLNAKGLRKAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECHHHHHHHH KIITVSEFSKNDIIKHIRYPEDKIEIIPPAVNHNLYYQNRNKSILKKYGIKEDEKVILYV HEEEHHHCCHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCHHHHHHCCCCCCCEEEEEE GAEEPRKNIQVLINSFDKLKSKISQIKLLKVGTPNYLGVREKLLKQIESLNLQKDVIFAG CCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEE YVPESELAKIYNAVDLFVFPSLYEGFGIPPLEAMACGTPVITSNSSSLPEVVGDAAIIID CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEECCCCCCHHHHCCEEEEEE PYDANKFAEKMYEVLINDGLKEEIVRKGLRRSKMFSWEDSARKTLKVYKEFRP CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA