| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is wcaL [C]
Identifier: 21226751
GI number: 21226751
Start: 779325
End: 780449
Strand: Direct
Name: wcaL [C]
Synonym: MM_0649
Alternate gene names: 21226751
Gene position: 779325-780449 (Clockwise)
Preceding gene: 21226742
Following gene: 21226752
Centisome position: 19.02
GC content: 40.36
Gene sequence:
>1125_bases TTGAAAATAGCCCAGATCTGTCCTCGTTATTCTCCTGATATTGGAGGAGTGGAAACACATGTCAAAGAAATTAGCGAGAG GCTGGTCAAGGCAGGGCATGATGTTGAGGTTATAACAACGGACCCGAGTGGAAAACTCGAAAAAAGGGACACGATAAATG GAGTGAAGGTCATAAGGTTCAGGTCTTTCGCCCCAGGAAATGCATACTACTTTGCCCCTCAGATCTATTTTTATCTTAAA AAGCACAATTTTGATGTGATTCATGCACACAGCTATCACGCTCTTCCGGCTTTATTTGCAGCTCTTGGAAAACGTGAAAG AAAGTTAGTTTTTACGCCCCATTATCACCGGAGCGGGCATACTGCATTTAGAAACCTGCTGCATAAACCGTACAGGCTCT TTGGAAAAGTTATATTTTCCAGGTCAGATTCCGTGATATGTGTCTCAGAGTACGAAAAAAGGCTAGTTGAGGCTGATTTT AGAGTTGAAGGAAAAACTGTAAAAATTCCAAATGGGATCAATCTCAAAGAGTTTGAGCATCTGAGAAATAGTCAAAAAGG TAAAGGCGTTGAAAAGAAAAAAGGAAAAGAGAAAACTCTCCTTTATGTTGGTCGTCTGGAAGAGTATAAAGGGGTGCAGT ATATAATTCAAAGCCTGCCTGAACTGAAAGATTTCAGGTTACAAGTCGTTGGAAATGGGCCCTACGAAGAAGAGCTCCGC AATATGGCAAAAAACCTCGGAGTAGATGAGAGGGTTGAATGGCTGAAAAATCTCTCAAGAGAAGAACTGCTTGAATGCTA TGCAGATGCCGATATATTTTTGATGCTCTCTTCCCATGAAGCATATGGAATAACGGTTGCTGAGGCACTGGCTGCAGGAA TACCATGTGTGGTTGCAAAGGGGAGTGCACTTGAAGAGTTTGTTGACGGGGAAAATTGCGCAGGGATTGAGAATCCTGTA ACAGTAGAAAAAGTGATTGATTCGCTTCAAAAAATTGAGATATTTAAAAGAGAACCGGTTTCTGGGATATTAAAGGGAAT AATGGACTGGAATGAAGTATCAGCTAGAATAGAAAAAGAGTACATAAGGCAAAGTAATAAGACAAATCATAAATTGTTTA ATTAA
Upstream 100 bases:
>100_bases AATGTTTCTGCTGGATGCCATCTATCTTAACTATCACATTATCTTTATATTAAGCTAATGCATTACTCCTTATAATTATT CGTGTAAAAGAGGTTTATTC
Downstream 100 bases:
>100_bases AAGTAACAATTTACAAAGTCATTCCTGAATTTTTGGGGAACTTAGAGATGGAAATTGATTATATAAACGGCCTGAAAACG GACGAAATATTCGGGATGTC
Product: glucosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKIAQICPRYSPDIGGVETHVKEISERLVKAGHDVEVITTDPSGKLEKRDTINGVKVIRFRSFAPGNAYYFAPQIYFYLK KHNFDVIHAHSYHALPALFAALGKRERKLVFTPHYHRSGHTAFRNLLHKPYRLFGKVIFSRSDSVICVSEYEKRLVEADF RVEGKTVKIPNGINLKEFEHLRNSQKGKGVEKKKGKEKTLLYVGRLEEYKGVQYIIQSLPELKDFRLQVVGNGPYEEELR NMAKNLGVDERVEWLKNLSREELLECYADADIFLMLSSHEAYGITVAEALAAGIPCVVAKGSALEEFVDGENCAGIENPV TVEKVIDSLQKIEIFKREPVSGILKGIMDWNEVSARIEKEYIRQSNKTNHKLFN
Sequences:
>Translated_374_residues MKIAQICPRYSPDIGGVETHVKEISERLVKAGHDVEVITTDPSGKLEKRDTINGVKVIRFRSFAPGNAYYFAPQIYFYLK KHNFDVIHAHSYHALPALFAALGKRERKLVFTPHYHRSGHTAFRNLLHKPYRLFGKVIFSRSDSVICVSEYEKRLVEADF RVEGKTVKIPNGINLKEFEHLRNSQKGKGVEKKKGKEKTLLYVGRLEEYKGVQYIIQSLPELKDFRLQVVGNGPYEEELR NMAKNLGVDERVEWLKNLSREELLECYADADIFLMLSSHEAYGITVAEALAAGIPCVVAKGSALEEFVDGENCAGIENPV TVEKVIDSLQKIEIFKREPVSGILKGIMDWNEVSARIEKEYIRQSNKTNHKLFN >Mature_374_residues MKIAQICPRYSPDIGGVETHVKEISERLVKAGHDVEVITTDPSGKLEKRDTINGVKVIRFRSFAPGNAYYFAPQIYFYLK KHNFDVIHAHSYHALPALFAALGKRERKLVFTPHYHRSGHTAFRNLLHKPYRLFGKVIFSRSDSVICVSEYEKRLVEADF RVEGKTVKIPNGINLKEFEHLRNSQKGKGVEKKKGKEKTLLYVGRLEEYKGVQYIIQSLPELKDFRLQVVGNGPYEEELR NMAKNLGVDERVEWLKNLSREELLECYADADIFLMLSSHEAYGITVAEALAAGIPCVVAKGSALEEFVDGENCAGIENPV TVEKVIDSLQKIEIFKREPVSGILKGIMDWNEVSARIEKEYIRQSNKTNHKLFN
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Homo sapiens, GI11863130, Length=384, Percent_Identity=23.4375, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17532709, Length=386, Percent_Identity=25.6476683937824, Blast_Score=92, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI9755344, Length=387, Percent_Identity=24.031007751938, Blast_Score=102, Evalue=1e-22, Organism=Drosophila melanogaster, GI24654571, Length=322, Percent_Identity=23.9130434782609, Blast_Score=68, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 42642; Mature: 42642
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAQICPRYSPDIGGVETHVKEISERLVKAGHDVEVITTDPSGKLEKRDTINGVKVIRF CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEE RSFAPGNAYYFAPQIYFYLKKHNFDVIHAHSYHALPALFAALGKRERKLVFTPHYHRSGH ECCCCCCEEEECCEEEEEEECCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCH TAFRNLLHKPYRLFGKVIFSRSDSVICVSEYEKRLVEADFRVEGKTVKIPNGINLKEFEH HHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCEECCCEEECCCCCCHHHHHH LRNSQKGKGVEKKKGKEKTLLYVGRLEEYKGVQYIIQSLPELKDFRLQVVGNGPYEEELR HHCCCCCCCCHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCHHCCEEEEECCCCHHHHHH NMAKNLGVDERVEWLKNLSREELLECYADADIFLMLSSHEAYGITVAEALAAGIPCVVAK HHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEEC GSALEEFVDGENCAGIENPVTVEKVIDSLQKIEIFKREPVSGILKGIMDWNEVSARIEKE CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHH YIRQSNKTNHKLFN HHHCCCCCCCCCCC >Mature Secondary Structure MKIAQICPRYSPDIGGVETHVKEISERLVKAGHDVEVITTDPSGKLEKRDTINGVKVIRF CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEE RSFAPGNAYYFAPQIYFYLKKHNFDVIHAHSYHALPALFAALGKRERKLVFTPHYHRSGH ECCCCCCEEEECCEEEEEEECCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCH TAFRNLLHKPYRLFGKVIFSRSDSVICVSEYEKRLVEADFRVEGKTVKIPNGINLKEFEH HHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCEECCCEEECCCCCCHHHHHH LRNSQKGKGVEKKKGKEKTLLYVGRLEEYKGVQYIIQSLPELKDFRLQVVGNGPYEEELR HHCCCCCCCCHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCHHCCEEEEECCCCHHHHHH NMAKNLGVDERVEWLKNLSREELLECYADADIFLMLSSHEAYGITVAEALAAGIPCVVAK HHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEEC GSALEEFVDGENCAGIENPVTVEKVIDSLQKIEIFKREPVSGILKGIMDWNEVSARIEKE CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHH YIRQSNKTNHKLFN HHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]