Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226750
Identifier: 21226750
GI number: 21226750
Start: 778091
End: 779245
Strand: Reverse
Name: 21226750
Synonym: MM_0648
Alternate gene names: NA
Gene position: 779245-778091 (Counterclockwise)
Preceding gene: 21226753
Following gene: 21226749
Centisome position: 19.02
GC content: 40.69
Gene sequence:
>1155_bases ATGGCATCCAGCAGAAACATTTGCATAGTCGGACCTTCCAAGCGTTTTTTAAGTGGAATCAGTTATTATACTATTCGTCT GGCAAATGCAATGCATTCGGAAAAAGATGTTTCTGTTATCTGCTTCAGACAGTTGTTGCCAACCTTTCTTTTTCCCGGAA AGTCTCACGTCGGAAAAGATATCTCTAACCTGAACTTTTCTTCCGGAATCCCTGTTTTTGATGGAATGGACTATAATAAC CCACTGACGTGGCTCCGGGCATATAATTTCATTAAAGAACAGAAACCTGATGTCATAATTTTGCAGTGGTGGACCTCCTC AGTTGCCCATATGCAGCTCCTGTTAAAGATATTTGCAGGCATGTCAAATAAACCAAAAATTATAATCGAATTTCATGAAG TCGTGGATCCCTTTGAAGAGTCCATACTTCCTATTCGGTTATATTCGAAAATAACGGGAAAACTGCTTCGCAAAAACCTT GATGCATATATTACCCATTCGGAATCCGATAAACAGCTTGTTGCAGAAAGATATACAATTGCCCCTGAAAAAATCCATGT AATTCCACACGGGCTTTATGACCAGTATGGAAAACTGCTCGACACAAAGGAAGCAAAAAAGAATCTCTTGATAAATGAAG AGTTTGTGATTCTATCTTTTGGTTTGATCCGAAAGTACAAAGGGACTCCTTATCTAATCAGGGCGTTTGAACAGCTCCCT CTCGAGATTCTTGAAAAAAGTAGGCTGCTGATTGTCGGAGAAATCTGGGAAGACCGAAAAGAATTGATTGACCAGATCAG GGCTTCTCAGGTGCGTGATAAAATCACGCTTGTTGATGAGTACGTTCCTGACGGGAAAGTGAGCCTTTATTTCAGCGCTT CAGATGTAGTGGTTCTGCCCTATCTGAGAGCCTCACAGAGTGGGATTGCCCACATTGCGATGTCTTTTGGAAAGCCTGTT GTGGTCTCCGAGGTTGGCGGCTTAAAAGAATCAATGGCTGGATATGCAGGAACATTTTTTGTTTCTCCCGGAGATGTCGA TTCTCTCAGAAAAGCCATCCTTGACCAGTTCGAGAAAAAAATTCATTATGAAGTTCCTGATCAGAAATGGGATAGAATTA TAAACCGTTATATTGAATTATTAGAATCAATCTGA
Upstream 100 bases:
>100_bases ACAGATCTGGGCTATTTTCAAGAATAAACCTCTTTTACACGAATAATTATAAGGAGTAATGCATTAGCTTAATATAAAGA TAATGTGATAGTTAAGATAG
Downstream 100 bases:
>100_bases TTTTTTTTGTCACATAAATTATAATTTAATTGAAAAAATGCGTCTCTTAAAAGGAATAAACATGAATTCTGAGGATTATC CTGCATCAGTATTCAAAAAC
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase; Group 1 Glycosyl Transferase; Lipopolysaccharide Transferase Family Protein; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family Protein; Mannosyltransferase; Glycosyl Transferase Gt4J; Glycosyl Transferase Group 1 Protein; Glycosyltransferase Protein; Related Glycosyltransferase
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MASSRNICIVGPSKRFLSGISYYTIRLANAMHSEKDVSVICFRQLLPTFLFPGKSHVGKDISNLNFSSGIPVFDGMDYNN PLTWLRAYNFIKEQKPDVIILQWWTSSVAHMQLLLKIFAGMSNKPKIIIEFHEVVDPFEESILPIRLYSKITGKLLRKNL DAYITHSESDKQLVAERYTIAPEKIHVIPHGLYDQYGKLLDTKEAKKNLLINEEFVILSFGLIRKYKGTPYLIRAFEQLP LEILEKSRLLIVGEIWEDRKELIDQIRASQVRDKITLVDEYVPDGKVSLYFSASDVVVLPYLRASQSGIAHIAMSFGKPV VVSEVGGLKESMAGYAGTFFVSPGDVDSLRKAILDQFEKKIHYEVPDQKWDRIINRYIELLESI
Sequences:
>Translated_384_residues MASSRNICIVGPSKRFLSGISYYTIRLANAMHSEKDVSVICFRQLLPTFLFPGKSHVGKDISNLNFSSGIPVFDGMDYNN PLTWLRAYNFIKEQKPDVIILQWWTSSVAHMQLLLKIFAGMSNKPKIIIEFHEVVDPFEESILPIRLYSKITGKLLRKNL DAYITHSESDKQLVAERYTIAPEKIHVIPHGLYDQYGKLLDTKEAKKNLLINEEFVILSFGLIRKYKGTPYLIRAFEQLP LEILEKSRLLIVGEIWEDRKELIDQIRASQVRDKITLVDEYVPDGKVSLYFSASDVVVLPYLRASQSGIAHIAMSFGKPV VVSEVGGLKESMAGYAGTFFVSPGDVDSLRKAILDQFEKKIHYEVPDQKWDRIINRYIELLESI >Mature_383_residues ASSRNICIVGPSKRFLSGISYYTIRLANAMHSEKDVSVICFRQLLPTFLFPGKSHVGKDISNLNFSSGIPVFDGMDYNNP LTWLRAYNFIKEQKPDVIILQWWTSSVAHMQLLLKIFAGMSNKPKIIIEFHEVVDPFEESILPIRLYSKITGKLLRKNLD AYITHSESDKQLVAERYTIAPEKIHVIPHGLYDQYGKLLDTKEAKKNLLINEEFVILSFGLIRKYKGTPYLIRAFEQLPL EILEKSRLLIVGEIWEDRKELIDQIRASQVRDKITLVDEYVPDGKVSLYFSASDVVVLPYLRASQSGIAHIAMSFGKPVV VSEVGGLKESMAGYAGTFFVSPGDVDSLRKAILDQFEKKIHYEVPDQKWDRIINRYIELLESI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43865; Mature: 43733
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSRNICIVGPSKRFLSGISYYTIRLANAMHSEKDVSVICFRQLLPTFLFPGKSHVGKD CCCCCCEEEECCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCC ISNLNFSSGIPVFDGMDYNNPLTWLRAYNFIKEQKPDVIILQWWTSSVAHMQLLLKIFAG HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHC MSNKPKIIIEFHEVVDPFEESILPIRLYSKITGKLLRKNLDAYITHSESDKQLVAERYTI CCCCCEEEEEHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHC APEKIHVIPHGLYDQYGKLLDTKEAKKNLLINEEFVILSFGLIRKYKGTPYLIRAFEQLP CCCEEEEECCHHHHHHHHHHCHHHHHHCCEECCCEEEEEHHHHHHCCCCHHHHHHHHHCC LEILEKSRLLIVGEIWEDRKELIDQIRASQVRDKITLVDEYVPDGKVSLYFSASDVVVLP HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEE YLRASQSGIAHIAMSFGKPVVVSEVGGLKESMAGYAGTFFVSPGDVDSLRKAILDQFEKK EHHCCCCCHHHHHHHCCCCEEEHHHCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH IHYEVPDQKWDRIINRYIELLESI CCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASSRNICIVGPSKRFLSGISYYTIRLANAMHSEKDVSVICFRQLLPTFLFPGKSHVGKD CCCCCEEEECCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCC ISNLNFSSGIPVFDGMDYNNPLTWLRAYNFIKEQKPDVIILQWWTSSVAHMQLLLKIFAG HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHC MSNKPKIIIEFHEVVDPFEESILPIRLYSKITGKLLRKNLDAYITHSESDKQLVAERYTI CCCCCEEEEEHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHC APEKIHVIPHGLYDQYGKLLDTKEAKKNLLINEEFVILSFGLIRKYKGTPYLIRAFEQLP CCCEEEEECCHHHHHHHHHHCHHHHHHCCEECCCEEEEEHHHHHHCCCCHHHHHHHHHCC LEILEKSRLLIVGEIWEDRKELIDQIRASQVRDKITLVDEYVPDGKVSLYFSASDVVVLP HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEE YLRASQSGIAHIAMSFGKPVVVSEVGGLKESMAGYAGTFFVSPGDVDSLRKAILDQFEKK EHHCCCCCHHHHHHHCCCCEEEHHHCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH IHYEVPDQKWDRIINRYIELLESI CCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA