Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226749
Identifier: 21226749
GI number: 21226749
Start: 775507
End: 778053
Strand: Reverse
Name: 21226749
Synonym: MM_0647
Alternate gene names: NA
Gene position: 778053-775507 (Counterclockwise)
Preceding gene: 21226750
Following gene: 21226748
Centisome position: 18.99
GC content: 43.03
Gene sequence:
>2547_bases ATGCGTCTCTTAAAAGGAATAAACATGAATTCTGAGGATTATCCTGCATCAGTATTCAAAAACAAAATAAAGTCCAGCTT GCCTTATACCCTGGCAGTTGCGATAATTGGCTTTGTTTCCCTGTGGATTAGAACACGTCCATCTGAGTATGTTTTCCTAT CCAATGGGTTTGTAAGGTTTGGGGGCAATGATCCCTGGTACCATATGCGTACCCTGAATGTTCTTCTCGAAAATTATCCT CAAAGGATGTTTTTCAACCCTATGACCAATTATCCTTATGGCAGTTACATCCATTTCGGTCCTCTTTTTGACCAGATGAT GGCCATAATATCCTTAATTTTAGGACTGGGCAGCCCGAGTCAGGATCTTATCAATACTGTTGGTGCTTATTTCCCTGCAG TTCTGGGTGCTCTTACTGTTATTCCTGTTTACTATATCGGAAAATACCTCGGAGGTCGTAAAACCGGCATCCTCGCTGCA GTCCTTATTGCTTTTGCTCCGGGACAGTTTTTGTCACGTTCGATAATTGGTTTCACGGACCATCACGTGGCTGAGTCTCT ATTTAGCACATTCTTCATGATGTTTTTCATGCTGGCAATAATTACTGCAAAGAAAAATAATTTGCGTTTTGAAGATTTAT TCAATAAAAACTTCAATGTGGTTAAGGAGCCGCTTATTTATTCTGTAATTGCTGGTGTCATGTATTCCGCTTACCAGCTT TCCTGGCCAGGAGCTTCTCTTTTCTTGTTTATTGCCCTGGTTTATGCTGTTGTCCAGTATATCCTTGATAACTTTAATGG CGAATCGAGTGATTATCTCGGGTTCACAGGTATTATCACATTTCTGGTAAGTGCAATACTTATACTTCCATTTGTCCACC CTGATATGGGATTCTCTCTATATTATTACTCCTGGTTCCACGTTGCAACAGCCACCGGAATAGTAGTTTGTTTTGGAATT TTGAGCTTTATTGAAAGAGAATTCAAAAACCGAAATCTAAAAGCTTACTACTATCCTCTGGCAATATTCGGACTTGGCAT TTTCGGACTCCTTGCAATAAGAATCGCGTCCCCACCCATTTATTCACTTATTATAAACGCTCCACATACCGTATTTGGAG TCCAGACAGGCGGTCCTTCCACGATTGCCGAAGTATCCTCAATATTTTACGACGGTGGGGTTTTTACCCTCTCAAGAGTC TTTGGAAACTTTACTGCCTCGGGTTTCTTTGCTTCTTTGCTTGGAATGCTCGTCCTGATTGCAAATGCTGTCCGGAAACC GAAACCTGAAAAGGTACTGGTTCTTGTCTGGAGTGTTTTAATTCTCTTCACAATTTACGGCCAGAACCGCTTCGCGTACT ATTACTCAATAAATGTTTCAATTCTCAGTGCCTACATAGGAGGTTTACTTCTTGAAAAGGTAAAGTGGAATGAACTTGAT GAAAAATTCAAGTCCACTGTTAAATCTCCTGCAGATATTCCGGGCTTTTTGAAGTTCCTAAGGGTAGAGCAGGTTCTTAC GGTCCTGGCTATAGTGGTTGTACTTATTTATCCTGTGTACGGGTCTGCAATGGAACTTACAAAAGGCACAGGTGGTCCTG ATGGACCCTGGATAGAAACGTGTCTCTGGCTCAAATCCTATACTCCTGACCCGGGAATGGATTATAACGGAATTTACGAA GCTCCTGAAGACGGGAAGCTTTTCGATTATCCTGATTCTGCATACGGAATTATGTCCTGGTGGGATTATGGTCACTGGAT TGAAACTATCGGGCAAAGGATGCCCAATTCAAATCCTTTCCAGGCAGGAATCGGAGGACGCAGGGGAAGCATGGAGGAAG AAAATCAGCCTGGCTCTTCTACTTTCTTTACAGCTCAGTCTGAAGAAGAAGCAACTGAAGTGCTGGAGGCTATCCATCCC GACCCTGAAAAAGAAGGCGCTCGCTATATCATCTCGGATATTGAAATGGCCACTGGCAAGTTTTACGCAATGACTGCCTG GACCCTTGATACCGAAGGCTACTACCAGCCTTACTGGACTGGCAGTGACTACCAGTATCTTCCCTCCACACGTTATTTCG ATTCAATGGTGTCAAGGCTTCACCTTCTGGACGGAAATGGGCTTAAACATTACCGCCTTGTCCATGAGACCTGGGCTTAT CAAACCCAGGAAGCAGGATACAAGCAGGTCTATAATTTACTTTATGGAAGCAGCGTCCCTGAAGTTGATTCCGGCTATGT CAAGATTTTCGAGTATGTAATGGGTGCTAAAATCACAGGAACAGCTTCCCCCAATGAGACCGTTAATATAAACACAACAA TTTTGACAGGTCAGGGAAGAACGTTTGAGTATTCCCAGTCAACAAGTTCTGACTCTGAAGGAAGGTATGAATTTACTGTT CCTTATCCGACAGAAGGTCCCATCCCCGGGGAAACACAGTTCGATACTGCACCTGCGGGCGCTTATGTCGTAAGCTATGG GGATATAACAAAAGAAGTAAGGGTGAATGAGGAAGCAGTGCTGAATGGACAGGAAATAAAAATCTAA
Upstream 100 bases:
>100_bases GTTCCTGATCAGAAATGGGATAGAATTATAAACCGTTATATTGAATTATTAGAATCAATCTGATTTTTTTTGTCACATAA ATTATAATTTAATTGAAAAA
Downstream 100 bases:
>100_bases TGGCAACTTAAAGCCGGAAGCGGGATCTAAAGCTGATATGTGCCGGGATATGCAGATCCTGGGATGTGCAGAAAAAATTA AACTGCACCTGAAAATCTAA
Product: oligosaccharyl transferase
Products: NA
Alternate protein names: Oligosaccharyl Transferase; Transmembrane Oligosaccharyl Transferase; Transmembrane Oligosaccharyltransferase; Oligosaccharyltransferase; Oligosaccharyltransferase AglB
Number of amino acids: Translated: 848; Mature: 848
Protein sequence:
>848_residues MRLLKGINMNSEDYPASVFKNKIKSSLPYTLAVAIIGFVSLWIRTRPSEYVFLSNGFVRFGGNDPWYHMRTLNVLLENYP QRMFFNPMTNYPYGSYIHFGPLFDQMMAIISLILGLGSPSQDLINTVGAYFPAVLGALTVIPVYYIGKYLGGRKTGILAA VLIAFAPGQFLSRSIIGFTDHHVAESLFSTFFMMFFMLAIITAKKNNLRFEDLFNKNFNVVKEPLIYSVIAGVMYSAYQL SWPGASLFLFIALVYAVVQYILDNFNGESSDYLGFTGIITFLVSAILILPFVHPDMGFSLYYYSWFHVATATGIVVCFGI LSFIEREFKNRNLKAYYYPLAIFGLGIFGLLAIRIASPPIYSLIINAPHTVFGVQTGGPSTIAEVSSIFYDGGVFTLSRV FGNFTASGFFASLLGMLVLIANAVRKPKPEKVLVLVWSVLILFTIYGQNRFAYYYSINVSILSAYIGGLLLEKVKWNELD EKFKSTVKSPADIPGFLKFLRVEQVLTVLAIVVVLIYPVYGSAMELTKGTGGPDGPWIETCLWLKSYTPDPGMDYNGIYE APEDGKLFDYPDSAYGIMSWWDYGHWIETIGQRMPNSNPFQAGIGGRRGSMEEENQPGSSTFFTAQSEEEATEVLEAIHP DPEKEGARYIISDIEMATGKFYAMTAWTLDTEGYYQPYWTGSDYQYLPSTRYFDSMVSRLHLLDGNGLKHYRLVHETWAY QTQEAGYKQVYNLLYGSSVPEVDSGYVKIFEYVMGAKITGTASPNETVNINTTILTGQGRTFEYSQSTSSDSEGRYEFTV PYPTEGPIPGETQFDTAPAGAYVVSYGDITKEVRVNEEAVLNGQEIKI
Sequences:
>Translated_848_residues MRLLKGINMNSEDYPASVFKNKIKSSLPYTLAVAIIGFVSLWIRTRPSEYVFLSNGFVRFGGNDPWYHMRTLNVLLENYP QRMFFNPMTNYPYGSYIHFGPLFDQMMAIISLILGLGSPSQDLINTVGAYFPAVLGALTVIPVYYIGKYLGGRKTGILAA VLIAFAPGQFLSRSIIGFTDHHVAESLFSTFFMMFFMLAIITAKKNNLRFEDLFNKNFNVVKEPLIYSVIAGVMYSAYQL SWPGASLFLFIALVYAVVQYILDNFNGESSDYLGFTGIITFLVSAILILPFVHPDMGFSLYYYSWFHVATATGIVVCFGI LSFIEREFKNRNLKAYYYPLAIFGLGIFGLLAIRIASPPIYSLIINAPHTVFGVQTGGPSTIAEVSSIFYDGGVFTLSRV FGNFTASGFFASLLGMLVLIANAVRKPKPEKVLVLVWSVLILFTIYGQNRFAYYYSINVSILSAYIGGLLLEKVKWNELD EKFKSTVKSPADIPGFLKFLRVEQVLTVLAIVVVLIYPVYGSAMELTKGTGGPDGPWIETCLWLKSYTPDPGMDYNGIYE APEDGKLFDYPDSAYGIMSWWDYGHWIETIGQRMPNSNPFQAGIGGRRGSMEEENQPGSSTFFTAQSEEEATEVLEAIHP DPEKEGARYIISDIEMATGKFYAMTAWTLDTEGYYQPYWTGSDYQYLPSTRYFDSMVSRLHLLDGNGLKHYRLVHETWAY QTQEAGYKQVYNLLYGSSVPEVDSGYVKIFEYVMGAKITGTASPNETVNINTTILTGQGRTFEYSQSTSSDSEGRYEFTV PYPTEGPIPGETQFDTAPAGAYVVSYGDITKEVRVNEEAVLNGQEIKI >Mature_848_residues MRLLKGINMNSEDYPASVFKNKIKSSLPYTLAVAIIGFVSLWIRTRPSEYVFLSNGFVRFGGNDPWYHMRTLNVLLENYP QRMFFNPMTNYPYGSYIHFGPLFDQMMAIISLILGLGSPSQDLINTVGAYFPAVLGALTVIPVYYIGKYLGGRKTGILAA VLIAFAPGQFLSRSIIGFTDHHVAESLFSTFFMMFFMLAIITAKKNNLRFEDLFNKNFNVVKEPLIYSVIAGVMYSAYQL SWPGASLFLFIALVYAVVQYILDNFNGESSDYLGFTGIITFLVSAILILPFVHPDMGFSLYYYSWFHVATATGIVVCFGI LSFIEREFKNRNLKAYYYPLAIFGLGIFGLLAIRIASPPIYSLIINAPHTVFGVQTGGPSTIAEVSSIFYDGGVFTLSRV FGNFTASGFFASLLGMLVLIANAVRKPKPEKVLVLVWSVLILFTIYGQNRFAYYYSINVSILSAYIGGLLLEKVKWNELD EKFKSTVKSPADIPGFLKFLRVEQVLTVLAIVVVLIYPVYGSAMELTKGTGGPDGPWIETCLWLKSYTPDPGMDYNGIYE APEDGKLFDYPDSAYGIMSWWDYGHWIETIGQRMPNSNPFQAGIGGRRGSMEEENQPGSSTFFTAQSEEEATEVLEAIHP DPEKEGARYIISDIEMATGKFYAMTAWTLDTEGYYQPYWTGSDYQYLPSTRYFDSMVSRLHLLDGNGLKHYRLVHETWAY QTQEAGYKQVYNLLYGSSVPEVDSGYVKIFEYVMGAKITGTASPNETVNINTTILTGQGRTFEYSQSTSSDSEGRYEFTV PYPTEGPIPGETQFDTAPAGAYVVSYGDITKEVRVNEEAVLNGQEIKI
Specific function: Unknown
COG id: COG1287
COG function: function code R; Uncharacterized membrane protein, required for N-linked glycosylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94914; Mature: 94914
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLKGINMNSEDYPASVFKNKIKSSLPYTLAVAIIGFVSLWIRTRPSEYVFLSNGFVRF CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEE GGNDPWYHMRTLNVLLENYPQRMFFNPMTNYPYGSYIHFGPLFDQMMAIISLILGLGSPS CCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCH QDLINTVGAYFPAVLGALTVIPVYYIGKYLGGRKTGILAAVLIAFAPGQFLSRSIIGFTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCH HHVAESLFSTFFMMFFMLAIITAKKNNLRFEDLFNKNFNVVKEPLIYSVIAGVMYSAYQL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEE SWPGASLFLFIALVYAVVQYILDNFNGESSDYLGFTGIITFLVSAILILPFVHPDMGFSL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE YYYSWFHVATATGIVVCFGILSFIEREFKNRNLKAYYYPLAIFGLGIFGLLAIRIASPPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCC YSLIINAPHTVFGVQTGGPSTIAEVSSIFYDGGVFTLSRVFGNFTASGFFASLLGMLVLI EEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH ANAVRKPKPEKVLVLVWSVLILFTIYGQNRFAYYYSINVSILSAYIGGLLLEKVKWNELD HHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH EKFKSTVKSPADIPGFLKFLRVEQVLTVLAIVVVLIYPVYGSAMELTKGTGGPDGPWIET HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHH CLWLKSYTPDPGMDYNGIYEAPEDGKLFDYPDSAYGIMSWWDYGHWIETIGQRMPNSNPF HHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC QAGIGGRRGSMEEENQPGSSTFFTAQSEEEATEVLEAIHPDPEKEGARYIISDIEMATGK CCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCC FYAMTAWTLDTEGYYQPYWTGSDYQYLPSTRYFDSMVSRLHLLDGNGLKHYRLVHETWAY EEEEEEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH QTQEAGYKQVYNLLYGSSVPEVDSGYVKIFEYVMGAKITGTASPNETVNINTTILTGQGR HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCEEEEEEEEEECCCC TFEYSQSTSSDSEGRYEFTVPYPTEGPIPGETQFDTAPAGAYVVSYGDITKEVRVNEEAV EEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCHHHH LNGQEIKI CCCCEECC >Mature Secondary Structure MRLLKGINMNSEDYPASVFKNKIKSSLPYTLAVAIIGFVSLWIRTRPSEYVFLSNGFVRF CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEE GGNDPWYHMRTLNVLLENYPQRMFFNPMTNYPYGSYIHFGPLFDQMMAIISLILGLGSPS CCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCH QDLINTVGAYFPAVLGALTVIPVYYIGKYLGGRKTGILAAVLIAFAPGQFLSRSIIGFTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCH HHVAESLFSTFFMMFFMLAIITAKKNNLRFEDLFNKNFNVVKEPLIYSVIAGVMYSAYQL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEE SWPGASLFLFIALVYAVVQYILDNFNGESSDYLGFTGIITFLVSAILILPFVHPDMGFSL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE YYYSWFHVATATGIVVCFGILSFIEREFKNRNLKAYYYPLAIFGLGIFGLLAIRIASPPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCC YSLIINAPHTVFGVQTGGPSTIAEVSSIFYDGGVFTLSRVFGNFTASGFFASLLGMLVLI EEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH ANAVRKPKPEKVLVLVWSVLILFTIYGQNRFAYYYSINVSILSAYIGGLLLEKVKWNELD HHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH EKFKSTVKSPADIPGFLKFLRVEQVLTVLAIVVVLIYPVYGSAMELTKGTGGPDGPWIET HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHH CLWLKSYTPDPGMDYNGIYEAPEDGKLFDYPDSAYGIMSWWDYGHWIETIGQRMPNSNPF HHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC QAGIGGRRGSMEEENQPGSSTFFTAQSEEEATEVLEAIHPDPEKEGARYIISDIEMATGK CCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCC FYAMTAWTLDTEGYYQPYWTGSDYQYLPSTRYFDSMVSRLHLLDGNGLKHYRLVHETWAY EEEEEEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH QTQEAGYKQVYNLLYGSSVPEVDSGYVKIFEYVMGAKITGTASPNETVNINTTILTGQGR HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCEEEEEEEEEECCCC TFEYSQSTSSDSEGRYEFTVPYPTEGPIPGETQFDTAPAGAYVVSYGDITKEVRVNEEAV EEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCHHHH LNGQEIKI CCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA