| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226737
Identifier: 21226737
GI number: 21226737
Start: 764813
End: 765448
Strand: Direct
Name: 21226737
Synonym: MM_0635
Alternate gene names: NA
Gene position: 764813-765448 (Clockwise)
Preceding gene: 21226736
Following gene: 21226738
Centisome position: 18.67
GC content: 43.71
Gene sequence:
>636_bases TTGGTAGAATCGTTAGACAAACAGGTTAAACGCATAGCATGGGGAATTACAGGTTCCGGAGACCAGATGATTGAAACTTA CAGCATTCTGGTAGACATAAAGAACAGAACAGGCGTTGAGACAATGGTTTTCCTGTCCAAAGAAGGGGAAACCGTAATGA AGTGGTATCATCTATGGGATAAAATTCAAAATGATTTCCCTAATTTTAAAGTGGATGCAGGCCCGAACTCTCCATTCATT GCAGGCCCGCTGCAGATGGGATATTATGATTTCCTGCTGATAGCCCCGGCAACCGCCAATACAGTAGCAAAAATAGTGTA CGGAATTGCAGATACCCTTGTTACGAACGCGGTGTCTCAGACAGCAAAAGGAAAGACGCCCATATTCATCCTTCCTGTGG ACCAGAAGAGGGGAACTGTAAAAACTGCCGCACCCAGTGGCAGGGCGTTTGAGCTTACAATGCGTGAAGTAGATGTTACA AACTCGGAAAAGCTTGCGCAGATGGAAAACATAAACATACTTACCAGCCCCTATGAAATATATGACATATTCGGGATTGA AAGGCCTACTGAAGATATAACTGTAAAAGTTCGGGAACAGAAGAGAAAGAAAGCAAAGAAGGTAGCTGAGAGTTGA
Upstream 100 bases:
>100_bases AGGCGGGGTAAAGGGTTAAAGATTCGGAAGTCCGGGAATAATCACATGATCATGGTAATAAGTCATCAGAGATTGGATTG AAGCCCAGGAAGGTGTTATC
Downstream 100 bases:
>100_bases AAACTCTTAAAATAAGGGGAAACCTGAAAAATAAAATGGGGGAAAAATATGGAAAGCGCATACCAGAACACTGTAGATGA AGTAAGGAATCTTAAAGGGA
Product: flavoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MVESLDKQVKRIAWGITGSGDQMIETYSILVDIKNRTGVETMVFLSKEGETVMKWYHLWDKIQNDFPNFKVDAGPNSPFI AGPLQMGYYDFLLIAPATANTVAKIVYGIADTLVTNAVSQTAKGKTPIFILPVDQKRGTVKTAAPSGRAFELTMREVDVT NSEKLAQMENINILTSPYEIYDIFGIERPTEDITVKVREQKRKKAKKVAES
Sequences:
>Translated_211_residues MVESLDKQVKRIAWGITGSGDQMIETYSILVDIKNRTGVETMVFLSKEGETVMKWYHLWDKIQNDFPNFKVDAGPNSPFI AGPLQMGYYDFLLIAPATANTVAKIVYGIADTLVTNAVSQTAKGKTPIFILPVDQKRGTVKTAAPSGRAFELTMREVDVT NSEKLAQMENINILTSPYEIYDIFGIERPTEDITVKVREQKRKKAKKVAES >Mature_211_residues MVESLDKQVKRIAWGITGSGDQMIETYSILVDIKNRTGVETMVFLSKEGETVMKWYHLWDKIQNDFPNFKVDAGPNSPFI AGPLQMGYYDFLLIAPATANTVAKIVYGIADTLVTNAVSQTAKGKTPIFILPVDQKRGTVKTAAPSGRAFELTMREVDVT NSEKLAQMENINILTSPYEIYDIFGIERPTEDITVKVREQKRKKAKKVAES
Specific function: Unknown
COG id: COG1036
COG function: function code C; Archaeal flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0208 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014072 - InterPro: IPR003382 [H]
Pfam domain/function: PF02441 Flavoprotein [H]
EC number: NA
Molecular weight: Translated: 23597; Mature: 23597
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVESLDKQVKRIAWGITGSGDQMIETYSILVDIKNRTGVETMVFLSKEGETVMKWYHLWD CCCHHHHHHHHHHCCCCCCCCHHHEEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHH KIQNDFPNFKVDAGPNSPFIAGPLQMGYYDFLLIAPATANTVAKIVYGIADTLVTNAVSQ HHHHCCCCEEEECCCCCCEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH TAKGKTPIFILPVDQKRGTVKTAAPSGRAFELTMREVDVTNSEKLAQMENINILTSPYEI HCCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEEEECCCCCHHHHHHHCCEEEECCCEE YDIFGIERPTEDITVKVREQKRKKAKKVAES EEEECCCCCCCCEEEEEHHHHHHHHHHHCCC >Mature Secondary Structure MVESLDKQVKRIAWGITGSGDQMIETYSILVDIKNRTGVETMVFLSKEGETVMKWYHLWD CCCHHHHHHHHHHCCCCCCCCHHHEEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHH KIQNDFPNFKVDAGPNSPFIAGPLQMGYYDFLLIAPATANTVAKIVYGIADTLVTNAVSQ HHHHCCCCEEEECCCCCCEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH TAKGKTPIFILPVDQKRGTVKTAAPSGRAFELTMREVDVTNSEKLAQMENINILTSPYEI HCCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEEEECCCCCHHHHHHHCCEEEECCCEE YDIFGIERPTEDITVKVREQKRKKAKKVAES EEEECCCCCCCCEEEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]