Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226736

Identifier: 21226736

GI number: 21226736

Start: 764022

End: 764708

Strand: Direct

Name: 21226736

Synonym: MM_0634

Alternate gene names: NA

Gene position: 764022-764708 (Clockwise)

Preceding gene: 21226735

Following gene: 21226737

Centisome position: 18.65

GC content: 46.58

Gene sequence:

>687_bases
ATGCAGGAAACCGAAGCCAAACCTATAAGGATCCTGGGAATATCGGGAAGCCCCAGAAATATGGCAACTGATTATCTGGT
TCAGGAAGCCCTGAAAATCGCAAAGGAGAAGTATGGTGCAGAGACGGAATATTTCTCCGCAAAAGGAAAAAAACTGAATT
TCTGTATCCACTGTGATTTCTGTATTAGAAAGAAAGAAGGCTGCATCCATAAGGACGACATAGCGGCTGAACTTTACGAT
AAAATGATCTGGGCAGATGCCTGGATAATAGGAACTCCTGTTTATCAGGGAACAATAAGTGCCCAGACTAAAACGATAAT
GGACCGCTGCAGGGCTGTGGTCGCAAGGGACCCTAAAGTATTTTTAAATAAAGTAGGGATGGGGATTGCGGACGGAGGAG
ACCGCATAGGCGGACAGGAACCTGCTATTCAGACAATTCATACTTTTTACATAATTAATGAAATGATTCCTGTTGGAGGA
GGCTCTTTCGGGGCAAACCTGGGAGGCACCTTCTGGTCAAAGGACAAAGGGGCAGAAGGGGTTTCTGAGGATTCGGAAGG
CATGCGGAGCCTTAGAAGAACCCTTAAGAAGCTTATCCAGACAGCCCAGCTCGTAAAGAGGGCTGATGCCTCGGAAGAGC
CTCAAACTCCTGCGCCTGAAATATCCGGAGAAGCACATAAGCAGTAA

Upstream 100 bases:

>100_bases
AAGCCACAACATCATATGGATGAATCCGGAAGTTGCCGACTTCGATAAACCCTGAATCTGATTCAAAAGACCCTTAATTT
AGAGATACAGGAGAAGGGAC

Downstream 100 bases:

>100_bases
CTCCAGGCGGGGTAAAGGGTTAAAGATTCGGAAGTCCGGGAATAATCACATGATCATGGTAATAAGTCATCAGAGATTGG
ATTGAAGCCCAGGAAGGTGT

Product: iron-sulfur flavoprotein

Products: NA

Alternate protein names: Isf-1; MCJ-1; Mj1 [H]

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MQETEAKPIRILGISGSPRNMATDYLVQEALKIAKEKYGAETEYFSAKGKKLNFCIHCDFCIRKKEGCIHKDDIAAELYD
KMIWADAWIIGTPVYQGTISAQTKTIMDRCRAVVARDPKVFLNKVGMGIADGGDRIGGQEPAIQTIHTFYIINEMIPVGG
GSFGANLGGTFWSKDKGAEGVSEDSEGMRSLRRTLKKLIQTAQLVKRADASEEPQTPAPEISGEAHKQ

Sequences:

>Translated_228_residues
MQETEAKPIRILGISGSPRNMATDYLVQEALKIAKEKYGAETEYFSAKGKKLNFCIHCDFCIRKKEGCIHKDDIAAELYD
KMIWADAWIIGTPVYQGTISAQTKTIMDRCRAVVARDPKVFLNKVGMGIADGGDRIGGQEPAIQTIHTFYIINEMIPVGG
GSFGANLGGTFWSKDKGAEGVSEDSEGMRSLRRTLKKLIQTAQLVKRADASEEPQTPAPEISGEAHKQ
>Mature_228_residues
MQETEAKPIRILGISGSPRNMATDYLVQEALKIAKEKYGAETEYFSAKGKKLNFCIHCDFCIRKKEGCIHKDDIAAELYD
KMIWADAWIIGTPVYQGTISAQTKTIMDRCRAVVARDPKVFLNKVGMGIADGGDRIGGQEPAIQTIHTFYIINEMIPVGG
GSFGANLGGTFWSKDKGAEGVSEDSEGMRSLRRTLKKLIQTAQLVKRADASEEPQTPAPEISGEAHKQ

Specific function: Redox-active protein probably involved in electron transport [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 25042; Mature: 25042

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQETEAKPIRILGISGSPRNMATDYLVQEALKIAKEKYGAETEYFSAKGKKLNFCIHCDF
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEECHH
CIRKKEGCIHKDDIAAELYDKMIWADAWIIGTPVYQGTISAQTKTIMDRCRAVVARDPKV
HHCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHH
FLNKVGMGIADGGDRIGGQEPAIQTIHTFYIINEMIPVGGGSFGANLGGTFWSKDKGAEG
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
VSEDSEGMRSLRRTLKKLIQTAQLVKRADASEEPQTPAPEISGEAHKQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQETEAKPIRILGISGSPRNMATDYLVQEALKIAKEKYGAETEYFSAKGKKLNFCIHCDF
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEECHH
CIRKKEGCIHKDDIAAELYDKMIWADAWIIGTPVYQGTISAQTKTIMDRCRAVVARDPKV
HHCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHH
FLNKVGMGIADGGDRIGGQEPAIQTIHTFYIINEMIPVGGGSFGANLGGTFWSKDKGAEG
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
VSEDSEGMRSLRRTLKKLIQTAQLVKRADASEEPQTPAPEISGEAHKQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]