| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226736
Identifier: 21226736
GI number: 21226736
Start: 764022
End: 764708
Strand: Direct
Name: 21226736
Synonym: MM_0634
Alternate gene names: NA
Gene position: 764022-764708 (Clockwise)
Preceding gene: 21226735
Following gene: 21226737
Centisome position: 18.65
GC content: 46.58
Gene sequence:
>687_bases ATGCAGGAAACCGAAGCCAAACCTATAAGGATCCTGGGAATATCGGGAAGCCCCAGAAATATGGCAACTGATTATCTGGT TCAGGAAGCCCTGAAAATCGCAAAGGAGAAGTATGGTGCAGAGACGGAATATTTCTCCGCAAAAGGAAAAAAACTGAATT TCTGTATCCACTGTGATTTCTGTATTAGAAAGAAAGAAGGCTGCATCCATAAGGACGACATAGCGGCTGAACTTTACGAT AAAATGATCTGGGCAGATGCCTGGATAATAGGAACTCCTGTTTATCAGGGAACAATAAGTGCCCAGACTAAAACGATAAT GGACCGCTGCAGGGCTGTGGTCGCAAGGGACCCTAAAGTATTTTTAAATAAAGTAGGGATGGGGATTGCGGACGGAGGAG ACCGCATAGGCGGACAGGAACCTGCTATTCAGACAATTCATACTTTTTACATAATTAATGAAATGATTCCTGTTGGAGGA GGCTCTTTCGGGGCAAACCTGGGAGGCACCTTCTGGTCAAAGGACAAAGGGGCAGAAGGGGTTTCTGAGGATTCGGAAGG CATGCGGAGCCTTAGAAGAACCCTTAAGAAGCTTATCCAGACAGCCCAGCTCGTAAAGAGGGCTGATGCCTCGGAAGAGC CTCAAACTCCTGCGCCTGAAATATCCGGAGAAGCACATAAGCAGTAA
Upstream 100 bases:
>100_bases AAGCCACAACATCATATGGATGAATCCGGAAGTTGCCGACTTCGATAAACCCTGAATCTGATTCAAAAGACCCTTAATTT AGAGATACAGGAGAAGGGAC
Downstream 100 bases:
>100_bases CTCCAGGCGGGGTAAAGGGTTAAAGATTCGGAAGTCCGGGAATAATCACATGATCATGGTAATAAGTCATCAGAGATTGG ATTGAAGCCCAGGAAGGTGT
Product: iron-sulfur flavoprotein
Products: NA
Alternate protein names: Isf-1; MCJ-1; Mj1 [H]
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MQETEAKPIRILGISGSPRNMATDYLVQEALKIAKEKYGAETEYFSAKGKKLNFCIHCDFCIRKKEGCIHKDDIAAELYD KMIWADAWIIGTPVYQGTISAQTKTIMDRCRAVVARDPKVFLNKVGMGIADGGDRIGGQEPAIQTIHTFYIINEMIPVGG GSFGANLGGTFWSKDKGAEGVSEDSEGMRSLRRTLKKLIQTAQLVKRADASEEPQTPAPEISGEAHKQ
Sequences:
>Translated_228_residues MQETEAKPIRILGISGSPRNMATDYLVQEALKIAKEKYGAETEYFSAKGKKLNFCIHCDFCIRKKEGCIHKDDIAAELYD KMIWADAWIIGTPVYQGTISAQTKTIMDRCRAVVARDPKVFLNKVGMGIADGGDRIGGQEPAIQTIHTFYIINEMIPVGG GSFGANLGGTFWSKDKGAEGVSEDSEGMRSLRRTLKKLIQTAQLVKRADASEEPQTPAPEISGEAHKQ >Mature_228_residues MQETEAKPIRILGISGSPRNMATDYLVQEALKIAKEKYGAETEYFSAKGKKLNFCIHCDFCIRKKEGCIHKDDIAAELYD KMIWADAWIIGTPVYQGTISAQTKTIMDRCRAVVARDPKVFLNKVGMGIADGGDRIGGQEPAIQTIHTFYIINEMIPVGG GSFGANLGGTFWSKDKGAEGVSEDSEGMRSLRRTLKKLIQTAQLVKRADASEEPQTPAPEISGEAHKQ
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 25042; Mature: 25042
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQETEAKPIRILGISGSPRNMATDYLVQEALKIAKEKYGAETEYFSAKGKKLNFCIHCDF CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEECHH CIRKKEGCIHKDDIAAELYDKMIWADAWIIGTPVYQGTISAQTKTIMDRCRAVVARDPKV HHCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHH FLNKVGMGIADGGDRIGGQEPAIQTIHTFYIINEMIPVGGGSFGANLGGTFWSKDKGAEG HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC VSEDSEGMRSLRRTLKKLIQTAQLVKRADASEEPQTPAPEISGEAHKQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQETEAKPIRILGISGSPRNMATDYLVQEALKIAKEKYGAETEYFSAKGKKLNFCIHCDF CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEECHH CIRKKEGCIHKDDIAAELYDKMIWADAWIIGTPVYQGTISAQTKTIMDRCRAVVARDPKV HHCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHH FLNKVGMGIADGGDRIGGQEPAIQTIHTFYIINEMIPVGGGSFGANLGGTFWSKDKGAEG HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC VSEDSEGMRSLRRTLKKLIQTAQLVKRADASEEPQTPAPEISGEAHKQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]