Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226694
Identifier: 21226694
GI number: 21226694
Start: 723321
End: 724061
Strand: Direct
Name: 21226694
Synonym: MM_0592
Alternate gene names: NA
Gene position: 723321-724061 (Clockwise)
Preceding gene: 21226693
Following gene: 21226695
Centisome position: 17.66
GC content: 46.29
Gene sequence:
>741_bases ATGGAAAGAGAAGAAGAATATTCACGGGAAAAAAACGGAGAAATAATAGCAGAAACTCCTGACGGGGGGAAGGAAGAAAA AGCGTACCCTCCGCAAGAGAATGCCTATCTGGCTGGCAGCAGGGAAATAAAATCCCTGCCTGAAGAGAGAGGCGCCTCAA AGATATCAGAATTTACGGGCTACCTGCGCTTCATCCAGCCTTATGTCCTTTTTATTACCTTTGTGTTCTTCGGGGCTTTG CTTGCAGGTTATCATTCATCGGCAAATTTTCCGGAGATGGCGGACCAACTCATGGAAGGGTTCAGTGCCCGTTTTGCACC CCTTCTTGCAATGCCCCCGATAGTCATTATGTTCGGGATATTTCTGAACAATGCCTTTGTAAGCCTGCTTTTTCTTGTGC TGGGGCTTGCCCTTGGCGTCCTTCCTGTACTGTTCATCGCTTTCAACGGGTATATTGTGGGAGTTATCTCGCATATAGTA GCCCAGGAAAGAGGTCTCCTTTTTATAGTCCTTGCTCTCCTTCCTCACGGAATCGTGGAGCTGCCTATGGTTTTTCTGTC AGCCGGAATAGGGCTCAGACTGGGGCACCAGGTTTTTGCCGCCCTTATAGGCAGGCCTACTGAAATAAAAAAAGAATTTA AGGAAGGACTACAATTTTATTTTCGCTGGATTTTGCCACTTCTCTTTCTGGCAGCTATAGTTGAGACCTTTATTACACCT TTGATCCTGAGTTTCCTCTAA
Upstream 100 bases:
>100_bases CCGGAATACAATCCGGATGATGCTTGGCATCTGAAAAGTCAGGAAACAGGTGCCTCGCTGATACCGGGGTTCAATGTGTC AGGTTTTATTGGGGATAAAC
Downstream 100 bases:
>100_bases AAATCAGACAAACAGAGCTGCCGTGAGAGGGCAAACCAGCCCTTCACCATACCTTTATTATATGCCCCCCTCAGCTTACC CTATATTTATAAATGATTAC
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MEREEEYSREKNGEIIAETPDGGKEEKAYPPQENAYLAGSREIKSLPEERGASKISEFTGYLRFIQPYVLFITFVFFGAL LAGYHSSANFPEMADQLMEGFSARFAPLLAMPPIVIMFGIFLNNAFVSLLFLVLGLALGVLPVLFIAFNGYIVGVISHIV AQERGLLFIVLALLPHGIVELPMVFLSAGIGLRLGHQVFAALIGRPTEIKKEFKEGLQFYFRWILPLLFLAAIVETFITP LILSFL
Sequences:
>Translated_246_residues MEREEEYSREKNGEIIAETPDGGKEEKAYPPQENAYLAGSREIKSLPEERGASKISEFTGYLRFIQPYVLFITFVFFGAL LAGYHSSANFPEMADQLMEGFSARFAPLLAMPPIVIMFGIFLNNAFVSLLFLVLGLALGVLPVLFIAFNGYIVGVISHIV AQERGLLFIVLALLPHGIVELPMVFLSAGIGLRLGHQVFAALIGRPTEIKKEFKEGLQFYFRWILPLLFLAAIVETFITP LILSFL >Mature_246_residues MEREEEYSREKNGEIIAETPDGGKEEKAYPPQENAYLAGSREIKSLPEERGASKISEFTGYLRFIQPYVLFITFVFFGAL LAGYHSSANFPEMADQLMEGFSARFAPLLAMPPIVIMFGIFLNNAFVSLLFLVLGLALGVLPVLFIAFNGYIVGVISHIV AQERGLLFIVLALLPHGIVELPMVFLSAGIGLRLGHQVFAALIGRPTEIKKEFKEGLQFYFRWILPLLFLAAIVETFITP LILSFL
Specific function: Unknown
COG id: COG1300
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27410; Mature: 27410
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEREEEYSREKNGEIIAETPDGGKEEKAYPPQENAYLAGSREIKSLPEERGASKISEFTG CCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEECCCHHHHHCHHHHHHHHHHHHHH YLRFIQPYVLFITFVFFGALLAGYHSSANFPEMADQLMEGFSARFAPLLAMPPIVIMFGI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLNNAFVSLLFLVLGLALGVLPVLFIAFNGYIVGVISHIVAQERGLLFIVLALLPHGIVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHH LPMVFLSAGIGLRLGHQVFAALIGRPTEIKKEFKEGLQFYFRWILPLLFLAAIVETFITP HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILSFL HHHHHC >Mature Secondary Structure MEREEEYSREKNGEIIAETPDGGKEEKAYPPQENAYLAGSREIKSLPEERGASKISEFTG CCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEECCCHHHHHCHHHHHHHHHHHHHH YLRFIQPYVLFITFVFFGALLAGYHSSANFPEMADQLMEGFSARFAPLLAMPPIVIMFGI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLNNAFVSLLFLVLGLALGVLPVLFIAFNGYIVGVISHIVAQERGLLFIVLALLPHGIVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHH LPMVFLSAGIGLRLGHQVFAALIGRPTEIKKEFKEGLQFYFRWILPLLFLAAIVETFITP HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILSFL HHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA