Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226693

Identifier: 21226693

GI number: 21226693

Start: 722397

End: 723254

Strand: Direct

Name: 21226693

Synonym: MM_0591

Alternate gene names: NA

Gene position: 722397-723254 (Clockwise)

Preceding gene: 21226689

Following gene: 21226694

Centisome position: 17.64

GC content: 44.64

Gene sequence:

>858_bases
ATGAGTTTTTTAATGGAAAAAATTTCACAATTTATCAATACCTATTATCTTGACCCCATAAAGGGCGATGAGGGGTATAA
CATTGTAAACACATTTACCTGGGCAGTGGTACTGGGTATCTGTATTTTCGGGGTTTTCAGGCTTCTTGAAAAGATGGAAG
TGAAGATAACCCCAAAGTTCATTCTCTCGCTCCTGCCATTCGTGCTTGCGGGCTCCTCCCTGCGTGTGCTCGAAGACTCG
CCTGCTAACATCTTTCACCCCCCTTTCAGCTATTTGCTTATAACTCCGAACATTTATTTCCTGGTCTTCGGAATAACAGT
GATCTGCCTGTGGCTCTCAATAAGGCTGCAGAAGGCGGGGCTTGTAAAGGATTATCATCCTGCCTTTGCAGGCTTCGGGC
TGGCATGGTTTTTATTGAACCTCGGAGCCCTGCTGTATTTTGAGGACATTGTAGTCCCTTACGTTCCGGTTTTTGTGCTT
GGGGCAGGTACAGGGCTAACATTTGTCTTTTATCTGGTTGCCCGACACTTAAAATCCGCGATTTTCACTGATCCCCTGAA
CCTTTCCATCCTTCTTGCCCATATGCTGGATGCTTCTTCGACATATATAGGGATAGATAAACTCGGGTATTTCGAAAAAC
ACGTGCTCCCCTCATATCTTATTAAACTTACGGATACTGCACTGGTTATGTATCCATTGAAGATAATTATCTTCGTAGGG
GTTCTTTACGCACTTGATACCCAGTTCGAGAAAGATGATGAGTCAACCAACCTGAAAATGCTGATTAAAATGGTCATCCT
GATCCTCGGGCTTTCTCCGGCAACCCGGAATACAATCCGGATGATGCTTGGCATCTGA

Upstream 100 bases:

>100_bases
AATGCAGTAAACATATTCAGCTATATACTGTGAGTATTTATTCAGCTATACTGTGAGTATTAATTGTATCAGGTCATTGC
CATTTTAAATGAGTGATAAG

Downstream 100 bases:

>100_bases
AAAGTCAGGAAACAGGTGCCTCGCTGATACCGGGGTTCAATGTGTCAGGTTTTATTGGGGATAAACATGGAAAGAGAAGA
AGAATATTCACGGGAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSFLMEKISQFINTYYLDPIKGDEGYNIVNTFTWAVVLGICIFGVFRLLEKMEVKITPKFILSLLPFVLAGSSLRVLEDS
PANIFHPPFSYLLITPNIYFLVFGITVICLWLSIRLQKAGLVKDYHPAFAGFGLAWFLLNLGALLYFEDIVVPYVPVFVL
GAGTGLTFVFYLVARHLKSAIFTDPLNLSILLAHMLDASSTYIGIDKLGYFEKHVLPSYLIKLTDTALVMYPLKIIIFVG
VLYALDTQFEKDDESTNLKMLIKMVILILGLSPATRNTIRMMLGI

Sequences:

>Translated_285_residues
MSFLMEKISQFINTYYLDPIKGDEGYNIVNTFTWAVVLGICIFGVFRLLEKMEVKITPKFILSLLPFVLAGSSLRVLEDS
PANIFHPPFSYLLITPNIYFLVFGITVICLWLSIRLQKAGLVKDYHPAFAGFGLAWFLLNLGALLYFEDIVVPYVPVFVL
GAGTGLTFVFYLVARHLKSAIFTDPLNLSILLAHMLDASSTYIGIDKLGYFEKHVLPSYLIKLTDTALVMYPLKIIIFVG
VLYALDTQFEKDDESTNLKMLIKMVILILGLSPATRNTIRMMLGI
>Mature_284_residues
SFLMEKISQFINTYYLDPIKGDEGYNIVNTFTWAVVLGICIFGVFRLLEKMEVKITPKFILSLLPFVLAGSSLRVLEDSP
ANIFHPPFSYLLITPNIYFLVFGITVICLWLSIRLQKAGLVKDYHPAFAGFGLAWFLLNLGALLYFEDIVVPYVPVFVLG
AGTGLTFVFYLVARHLKSAIFTDPLNLSILLAHMLDASSTYIGIDKLGYFEKHVLPSYLIKLTDTALVMYPLKIIIFVGV
LYALDTQFEKDDESTNLKMLIKMVILILGLSPATRNTIRMMLGI

Specific function: Unknown

COG id: COG1967

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002749 [H]

Pfam domain/function: PF01889 DUF63 [H]

EC number: NA

Molecular weight: Translated: 32102; Mature: 31971

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLMEKISQFINTYYLDPIKGDEGYNIVNTFTWAVVLGICIFGVFRLLEKMEVKITPKF
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ILSLLPFVLAGSSLRVLEDSPANIFHPPFSYLLITPNIYFLVFGITVICLWLSIRLQKAG
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
LVKDYHPAFAGFGLAWFLLNLGALLYFEDIVVPYVPVFVLGAGTGLTFVFYLVARHLKSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IFTDPLNLSILLAHMLDASSTYIGIDKLGYFEKHVLPSYLIKLTDTALVMYPLKIIIFVG
HHCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLYALDTQFEKDDESTNLKMLIKMVILILGLSPATRNTIRMMLGI
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SFLMEKISQFINTYYLDPIKGDEGYNIVNTFTWAVVLGICIFGVFRLLEKMEVKITPKF
CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ILSLLPFVLAGSSLRVLEDSPANIFHPPFSYLLITPNIYFLVFGITVICLWLSIRLQKAG
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
LVKDYHPAFAGFGLAWFLLNLGALLYFEDIVVPYVPVFVLGAGTGLTFVFYLVARHLKSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IFTDPLNLSILLAHMLDASSTYIGIDKLGYFEKHVLPSYLIKLTDTALVMYPLKIIIFVG
HHCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLYALDTQFEKDDESTNLKMLIKMVILILGLSPATRNTIRMMLGI
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]