Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is egsA [H]
Identifier: 21226692
GI number: 21226692
Start: 720368
End: 721438
Strand: Reverse
Name: egsA [H]
Synonym: MM_0590
Alternate gene names: 21226692
Gene position: 721438-720368 (Counterclockwise)
Preceding gene: 21226706
Following gene: 21226691
Centisome position: 17.61
GC content: 51.17
Gene sequence:
>1071_bases ATGAAATTGACCATTAATAAAAACAGCGCAAAATGGATGCAGCTTCCAAGAGACGTGCTTGTCGGGCACGGCGTCCTTGA AGAAGTGGGAGATGTCTGCAGGGACCTGAAACTCAAAGGAAATGCGCTGATAGTCACCGGAAGCACTACTCAGGATGTTG CAGGCAAAAGAGTCAGCAGACTTCTGGAGGACGCAGGGAACAGTACGGAAACGGTCCTTACGTGCAGGGCAACCATGGAA GAAGTTGATAAATTAATGGAAAAAGCCCTGAATACGGAAGCGACCTTTTTGCTCGGGGTGGGAAGCGGCAGGTCTATCGA TCTTGCAAAACTCGCTTCCACCAGGCTTGAAATTCCCTTTATCAGCGTGCCCACGGCAGCCTCTCATGACGGCATCGCAT CTTCTCGCGCCTCGGTAATAGACAACGGAAAAAATGCTTCCATACAGGCTCAGGCACCTCTTGCTGTGATTGCGGATACT GAAATTATTTCGGCCGCTCCGTACCGGTTCCTTGCAGCGGGCTGTGGAGACATCATTTCCAATTATACCGCAGTCCTGGA CTGGGAGCTTGCAAGCCGTCTCCGAAACGAGTATTTCGGGGAATACGCTGCTGCCCTCTCCAGAATGGCAGCAAGGGTGG TAATAGAAAACGCCGATTCAATAAAGCCAGACCATGAGACTTCAGCCAGGCTTGTGGTAAAAGCTCTGGTCTCAAACGGG GTCGCAATGAGTATTGCAGGCTCTTCAAGGCCGGCTTCGGGATCGGAACATATGTTCAGCCATGCCCTTGACAGGATTGC CCCAAAGGCTGCGCTTCATGGAGAGCAGTGCGGGGTTGGTACAATTATGATGATGTACCTGCACGGAGGAAACTGGCAGG AGATCAGGGATGCTCTGAAAAAAATCGGGGCTCCCACGAATGCTGAAGAGCTCGGCATAGAGGATAAATATATAATTGAA GCGCTCCTGCAGGCGCACAGCATCCGCCCGGACAGATACACCATTCTCGGAAATGGTCTGACGCTCTCGGCAGCTGAGAA AGTTGCAAGAATCACAAAGGTCATAAATTGA
Upstream 100 bases:
>100_bases ACTGACTGGATGGTTTAAGCCGGGTTTATATACTCAATCAATTAACTCTAATTAACTCTATTATAAATTATCATTATCAC GATCAAAAATTCATGCGGGT
Downstream 100 bases:
>100_bases AAAGTTGTTTTATTCAGGCTGAAATAGAAAATTATCAATTCTCCAAAACATCACGAAGCAATATGCTATAAATAAGCAGA ATCTTTTAACGCAGGATTCG
Product: NAD(P)-dependent glycerol-1-phosphate dehydrogenase
Products: NA
Alternate protein names: G1P dehydrogenase; G1PDH; Enantiomeric glycerophosphate synthase; sn-glycerol-1-phosphate dehydrogenase [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKLTINKNSAKWMQLPRDVLVGHGVLEEVGDVCRDLKLKGNALIVTGSTTQDVAGKRVSRLLEDAGNSTETVLTCRATME EVDKLMEKALNTEATFLLGVGSGRSIDLAKLASTRLEIPFISVPTAASHDGIASSRASVIDNGKNASIQAQAPLAVIADT EIISAAPYRFLAAGCGDIISNYTAVLDWELASRLRNEYFGEYAAALSRMAARVVIENADSIKPDHETSARLVVKALVSNG VAMSIAGSSRPASGSEHMFSHALDRIAPKAALHGEQCGVGTIMMMYLHGGNWQEIRDALKKIGAPTNAEELGIEDKYIIE ALLQAHSIRPDRYTILGNGLTLSAAEKVARITKVIN
Sequences:
>Translated_356_residues MKLTINKNSAKWMQLPRDVLVGHGVLEEVGDVCRDLKLKGNALIVTGSTTQDVAGKRVSRLLEDAGNSTETVLTCRATME EVDKLMEKALNTEATFLLGVGSGRSIDLAKLASTRLEIPFISVPTAASHDGIASSRASVIDNGKNASIQAQAPLAVIADT EIISAAPYRFLAAGCGDIISNYTAVLDWELASRLRNEYFGEYAAALSRMAARVVIENADSIKPDHETSARLVVKALVSNG VAMSIAGSSRPASGSEHMFSHALDRIAPKAALHGEQCGVGTIMMMYLHGGNWQEIRDALKKIGAPTNAEELGIEDKYIIE ALLQAHSIRPDRYTILGNGLTLSAAEKVARITKVIN >Mature_356_residues MKLTINKNSAKWMQLPRDVLVGHGVLEEVGDVCRDLKLKGNALIVTGSTTQDVAGKRVSRLLEDAGNSTETVLTCRATME EVDKLMEKALNTEATFLLGVGSGRSIDLAKLASTRLEIPFISVPTAASHDGIASSRASVIDNGKNASIQAQAPLAVIADT EIISAAPYRFLAAGCGDIISNYTAVLDWELASRLRNEYFGEYAAALSRMAARVVIENADSIKPDHETSARLVVKALVSNG VAMSIAGSSRPASGSEHMFSHALDRIAPKAALHGEQCGVGTIMMMYLHGGNWQEIRDALKKIGAPTNAEELGIEDKYIIE ALLQAHSIRPDRYTILGNGLTLSAAEKVARITKVIN
Specific function: Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol-1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea [H]
COG id: COG0371
COG function: function code C; Glycerol dehydrogenase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerol-1-phosphate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI87082352, Length=317, Percent_Identity=24.9211356466877, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002658 - InterPro: IPR023002 - InterPro: IPR016205 [H]
Pfam domain/function: PF01761 DHQ_synthase [H]
EC number: =1.1.1.261 [H]
Molecular weight: Translated: 38065; Mature: 38065
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTINKNSAKWMQLPRDVLVGHGVLEEVGDVCRDLKLKGNALIVTGSTTQDVAGKRVSR CEEEEECCCHHHHHCCHHHHHCCHHHHHHHHHHHHCEECCCEEEEECCCHHHHHHHHHHH LLEDAGNSTETVLTCRATMEEVDKLMEKALNTEATFLLGVGSGRSIDLAKLASTRLEIPF HHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCE ISVPTAASHDGIASSRASVIDNGKNASIQAQAPLAVIADTEIISAAPYRFLAAGCGDIIS EECCCCCCCCCCHHHHHHHHCCCCCCEEEECCCEEEEECCHHHHHCCHHHHHHHHHHHHC NYTAVLDWELASRLRNEYFGEYAAALSRMAARVVIENADSIKPDHETSARLVVKALVSNG CHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC VAMSIAGSSRPASGSEHMFSHALDRIAPKAALHGEQCGVGTIMMMYLHGGNWQEIRDALK EEEEEECCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCHHHEEEEEHCCCCHHHHHHHHH KIGAPTNAEELGIEDKYIIEALLQAHSIRPDRYTILGNGLTLSAAEKVARITKVIN HCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCEEHHHHHHHHHHHHHCC >Mature Secondary Structure MKLTINKNSAKWMQLPRDVLVGHGVLEEVGDVCRDLKLKGNALIVTGSTTQDVAGKRVSR CEEEEECCCHHHHHCCHHHHHCCHHHHHHHHHHHHCEECCCEEEEECCCHHHHHHHHHHH LLEDAGNSTETVLTCRATMEEVDKLMEKALNTEATFLLGVGSGRSIDLAKLASTRLEIPF HHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCE ISVPTAASHDGIASSRASVIDNGKNASIQAQAPLAVIADTEIISAAPYRFLAAGCGDIIS EECCCCCCCCCCHHHHHHHHCCCCCCEEEECCCEEEEECCHHHHHCCHHHHHHHHHHHHC NYTAVLDWELASRLRNEYFGEYAAALSRMAARVVIENADSIKPDHETSARLVVKALVSNG CHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC VAMSIAGSSRPASGSEHMFSHALDRIAPKAALHGEQCGVGTIMMMYLHGGNWQEIRDALK EEEEEECCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCHHHEEEEEHCCCCHHHHHHHHH KIGAPTNAEELGIEDKYIIEALLQAHSIRPDRYTILGNGLTLSAAEKVARITKVIN HCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]