Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226691

Identifier: 21226691

GI number: 21226691

Start: 719622

End: 720071

Strand: Reverse

Name: 21226691

Synonym: MM_0589

Alternate gene names: NA

Gene position: 720071-719622 (Counterclockwise)

Preceding gene: 21226692

Following gene: 21226690

Centisome position: 17.58

GC content: 45.78

Gene sequence:

>450_bases
ATGACAGAAAGCGATACCAAAATAACACTCATCGGATCACGGCTGGCAAGGGAAGGTCTGGAATTCATATTCAAAGGTGA
AATGCCTGAATGCAAGAAATGCCGTTTGAAGAACACCTGCCTTAACCTTGAACCCGGTCGCAGGTATAAAGTTGTTAGAA
TTAAAAGCAATGATATACACGAATGTTTCCTGCACGACAGCGGGGTTCTTGCGGTGGATGTCAGCAGGGCTCCCATCACA
ACAAGTGTGGAGTCCAGAAAAGCAGTTCAAGGGGCAAAAATTATGTATGAGCCCGCCAAATGTGGCAAGAGAGAGTGTGC
TGAGTATGAGACATGCCACCCTGAAGGGCTTATAAAAGGGGACAAATGCAAAATTGTAGAGGTCCTCGAGAGCCTTGATT
CAAAATGCGAAGCCGGCATTTCCTTGAAAAAGGTAAAGCTTGCATGGTGA

Upstream 100 bases:

>100_bases
ATGCCAGGATTCAGTACCGGACTCAAAATTTTTGGGATAACTCAGGTATATCCTGAAAACTCAGAAAAGGCCCGAAAAAA
ATTTAAATGGAAGAACTATT

Downstream 100 bases:

>100_bases
ACATAAACAAACACCTTTTAGTAATAGTAAGACTGATTATTAATAAAAAAGGTTTATAAGCGGTGTTAAAAGTGCCTGAA
CATGAAATGAACCAGGTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTESDTKITLIGSRLAREGLEFIFKGEMPECKKCRLKNTCLNLEPGRRYKVVRIKSNDIHECFLHDSGVLAVDVSRAPIT
TSVESRKAVQGAKIMYEPAKCGKRECAEYETCHPEGLIKGDKCKIVEVLESLDSKCEAGISLKKVKLAW

Sequences:

>Translated_149_residues
MTESDTKITLIGSRLAREGLEFIFKGEMPECKKCRLKNTCLNLEPGRRYKVVRIKSNDIHECFLHDSGVLAVDVSRAPIT
TSVESRKAVQGAKIMYEPAKCGKRECAEYETCHPEGLIKGDKCKIVEVLESLDSKCEAGISLKKVKLAW
>Mature_148_residues
TESDTKITLIGSRLAREGLEFIFKGEMPECKKCRLKNTCLNLEPGRRYKVVRIKSNDIHECFLHDSGVLAVDVSRAPITT
SVESRKAVQGAKIMYEPAKCGKRECAEYETCHPEGLIKGDKCKIVEVLESLDSKCEAGISLKKVKLAW

Specific function: Unknown

COG id: COG1860

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0179 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y589_METMA (Q8PZA5)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_632613.1
- GeneID:   1478931
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_0589
- NMPDR:   fig|192952.1.peg.589
- HOGENOM:   HBG540929
- OMA:   RSANHPC
- ProtClustDB:   CLSK811994
- BioCyc:   MMAZ192952:MM0589-MONOMER
- HAMAP:   MF_00498
- InterPro:   IPR005369
- PIRSF:   PIRSF006595
- ProDom:   PD016182

Pfam domain/function: PF03684 UPF0179

EC number: NA

Molecular weight: Translated: 16677; Mature: 16545

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESDTKITLIGSRLAREGLEFIFKGEMPECKKCRLKNTCLNLEPGRRYKVVRIKSNDIH
CCCCCCEEEEEHHHHHHHHHHEEECCCCCHHHHHHHCCCEECCCCCCEEEEEEECCCCCE
ECFLHDSGVLAVDVSRAPITTSVESRKAVQGAKIMYEPAKCGKRECAEYETCHPEGLIKG
EEEECCCCEEEEECCCCCCCCCCHHHHHHCCCEEEECCHHCCHHHHCCCCCCCCCCCCCC
DKCKIVEVLESLDSKCEAGISLKKVKLAW
CCHHHHHHHHHHHHHHHCCCEEEEEEECC
>Mature Secondary Structure 
TESDTKITLIGSRLAREGLEFIFKGEMPECKKCRLKNTCLNLEPGRRYKVVRIKSNDIH
CCCCCEEEEEHHHHHHHHHHEEECCCCCHHHHHHHCCCEECCCCCCEEEEEEECCCCCE
ECFLHDSGVLAVDVSRAPITTSVESRKAVQGAKIMYEPAKCGKRECAEYETCHPEGLIKG
EEEECCCCEEEEECCCCCCCCCCHHHHHHCCCEEEECCHHCCHHHHCCCCCCCCCCCCCC
DKCKIVEVLESLDSKCEAGISLKKVKLAW
CCHHHHHHHHHHHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824