Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226675
Identifier: 21226675
GI number: 21226675
Start: 700164
End: 700664
Strand: Direct
Name: 21226675
Synonym: MM_0573
Alternate gene names: NA
Gene position: 700164-700664 (Clockwise)
Preceding gene: 21226671
Following gene: 21226676
Centisome position: 17.09
GC content: 34.93
Gene sequence:
>501_bases ATGGATAGTATACGATTATTCAAAAAAGCTACAGATACAATCAGTACAATCTTTCTTTATATATTGCTGCTGGCATTAAT TGTGGGAATGGCAAAAACCTTACTTGATATTCGCTTTATTATTTTTGAGTCTCTTGAAAGTGGCTTCAATCACATGGTAA CAAGTGTGCTAACGGTCTTCATTGTTATTGACCTTTTCAAAGCTTTTGTTGATTATCACGAAAATGACAGAATCAAGCTC ACGGATATAACAGATGCTACAATTTTAATAGTCCTGCGTGAGATCGCTGTGGGCCTTTATTCCCAGGAATTAGGGTCTGA ATTTATATTAAGTTTGTCTACCTTGCTGCTAGTACTGGGTATAATGAGAGTACTGGCTGTAAAATATTCTCCGTCAAAAC CTCATACACCTTATATATTTGTACCGGAAGAAAGGCAACCTATAAAAGCAGACTTGAAAACCATAATTGATAACTTCAAT CCTGTTTACGACAATAATTAA
Upstream 100 bases:
>100_bases AATTGCCTATGTATTTATAAATTAAGTATATAGAATAGTGCGAAAAACTCTACATAACTTGAAAAATGATGAGTAGTGCA GTTGATATCAGGTGGAAGAT
Downstream 100 bases:
>100_bases TTTTTTGCATGTACTATAACCAAATATGAAATTAGTAGTATTAAACCTGCATAATGATGACCACACATGAACGCGGCTCT ATCCGGTACAACGCGGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MDSIRLFKKATDTISTIFLYILLLALIVGMAKTLLDIRFIIFESLESGFNHMVTSVLTVFIVIDLFKAFVDYHENDRIKL TDITDATILIVLREIAVGLYSQELGSEFILSLSTLLLVLGIMRVLAVKYSPSKPHTPYIFVPEERQPIKADLKTIIDNFN PVYDNN
Sequences:
>Translated_166_residues MDSIRLFKKATDTISTIFLYILLLALIVGMAKTLLDIRFIIFESLESGFNHMVTSVLTVFIVIDLFKAFVDYHENDRIKL TDITDATILIVLREIAVGLYSQELGSEFILSLSTLLLVLGIMRVLAVKYSPSKPHTPYIFVPEERQPIKADLKTIIDNFN PVYDNN >Mature_166_residues MDSIRLFKKATDTISTIFLYILLLALIVGMAKTLLDIRFIIFESLESGFNHMVTSVLTVFIVIDLFKAFVDYHENDRIKL TDITDATILIVLREIAVGLYSQELGSEFILSLSTLLLVLGIMRVLAVKYSPSKPHTPYIFVPEERQPIKADLKTIIDNFN PVYDNN
Specific function: Unknown
COG id: COG3431
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18872; Mature: 18872
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSIRLFKKATDTISTIFLYILLLALIVGMAKTLLDIRFIIFESLESGFNHMVTSVLTVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVIDLFKAFVDYHENDRIKLTDITDATILIVLREIAVGLYSQELGSEFILSLSTLLLVLG HHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMRVLAVKYSPSKPHTPYIFVPEERQPIKADLKTIIDNFNPVYDNN HHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDSIRLFKKATDTISTIFLYILLLALIVGMAKTLLDIRFIIFESLESGFNHMVTSVLTVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVIDLFKAFVDYHENDRIKLTDITDATILIVLREIAVGLYSQELGSEFILSLSTLLLVLG HHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMRVLAVKYSPSKPHTPYIFVPEERQPIKADLKTIIDNFNPVYDNN HHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA