Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226671
Identifier: 21226671
GI number: 21226671
Start: 695188
End: 695424
Strand: Direct
Name: 21226671
Synonym: MM_0569
Alternate gene names: NA
Gene position: 695188-695424 (Clockwise)
Preceding gene: 21226669
Following gene: 21226675
Centisome position: 16.97
GC content: 48.52
Gene sequence:
>237_bases ATGAGCCGTTACGGTTGTCAGGAGAGGGAAAAAGATCCTCGACTCCGTATATCTTTCAAGAGAGAAAGGAGAACACGTGG CAATCATAGGGCCCAACGGTTCGGGCAAGTCTTCCTGATAAAAACCCTGACAAAAGAGTACCACCCTCTGGCAGGAGCCG AAGGGCTTGTGCTGAAAATCATGGGAAAAGAAACATGGCACGTTTTTGACCTCAGGAAACTTCTCGGGATAGTGTGA
Upstream 100 bases:
>100_bases AATATCACTGATGTTAACCGGAAATATATAAGCCGAAAACATATGAGCTGGAAACTAATGAACCGAAAAAATATAAGCCG GATATATGAGTTGAAAACAT
Downstream 100 bases:
>100_bases TTGAAAAGAGGAAACTATTCCTTAATCACCTGGTAAGTCATGTAAGACTAATTGACTTAAAGTATCCGGATAAGGAATTA AATATATCTCGTTAAATTTG
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSRYGCQEREKDPRLRISFKRERRTRGNHRAQRFGQVFLIKTLTKEYHPLAGAEGLVLKIMGKETWHVFDLRKLLGIV
Sequences:
>Translated_78_residues MSRYGCQEREKDPRLRISFKRERRTRGNHRAQRFGQVFLIKTLTKEYHPLAGAEGLVLKIMGKETWHVFDLRKLLGIV >Mature_77_residues SRYGCQEREKDPRLRISFKRERRTRGNHRAQRFGQVFLIKTLTKEYHPLAGAEGLVLKIMGKETWHVFDLRKLLGIV
Specific function: Unknown
COG id: COG1119
COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9268; Mature: 9137
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYGCQEREKDPRLRISFKRERRTRGNHRAQRFGQVFLIKTLTKEYHPLAGAEGLVLKI CCCCCCCCCCCCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE MGKETWHVFDLRKLLGIV ECCCCHHHHHHHHHHCCC >Mature Secondary Structure SRYGCQEREKDPRLRISFKRERRTRGNHRAQRFGQVFLIKTLTKEYHPLAGAEGLVLKI CCCCCCCCCCCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE MGKETWHVFDLRKLLGIV ECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA