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The map label for this gene is 21226664

Identifier: 21226664

GI number: 21226664

Start: 687681

End: 688379

Strand: Reverse

Name: 21226664

Synonym: MM_0562

Alternate gene names: NA

Gene position: 688379-687681 (Counterclockwise)

Preceding gene: 21226665

Following gene: 21226663

Centisome position: 16.8

GC content: 35.19

Gene sequence:

>699_bases
ATGGACTGCTTGGTTTTTAGGGCAAAAAGTGGATATGCTAAGTTCCGAAAACCGTATACCACTACATCAGCTCTCACCTT
TTTGTGTATCCATCCTCCAGCCGTAAAGGGGCTTATTGGAGCGGTTCTGGGTATTGACAAAACTGAAATTTATAGAAATA
CTCTTGACCTAAAAATCGGTATTCAAGTGCTTTCTCCTGTTCGCAAAGATATGCAAGTTCTAAAGTTAGTGAGCATGAAA
GCTGAGAAAGATCTTTTTAATTTTCCAGTAAATGCTGAATTTTTAAGGGATCCAGAGTATCGAATTTTTGTTTCGTGGTT
GCCTGACAAACTTGATGAGCTTGAAGATAGATTGCAGAATCAGATGCCTATATTCACTCCTTATCTGGGAGTAAGTGAAT
ATATTGCAAAATTAGATTATGAAAAAAGAGTCAATGCTGAATTATTGACAAAATCAAGTAGCATTGATAGTCTTGTACCC
TCTCGTTTTATAGATCTCCAGCACTCTGACTATCACATATTTACAGATAACATTCCTGTATCTAATAATGAAAAGAGGGA
GTATATAAGTTATGAGAAGATTTTGTTTGCTTTCAGAGAGGATGATACTTGTAAAAAAGAGATAGCATGCAGTTTAATGG
GGAATCTAAAAAGGGATGTGTATAAAGTTGATGAAAACATCGTTTTCTTCTTTGAATAA

Upstream 100 bases:

>100_bases
CAATAGATACTGTACGCATATACAAACACGGCAGTGTAAAAGTGAATAACCTCCCGGATGATTTTAAGGTAATTGACTTT
TAATTGAGAGGCGTTCTTTA

Downstream 100 bases:

>100_bases
TGGTTTTATTTTGAGGTCACACTTTCATCAATCGTTGAAAGACCATTTGGAAGAAGTCACTTCTATAGCAACTCATATTT
ATGACTCCCAGAATAATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Hmari Subtype Protein; Cas5h Crispr-Associated Hmari Subtype; Crispr-Associated Hmari Subtype; CRISPR-Associated Protein

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDCLVFRAKSGYAKFRKPYTTTSALTFLCIHPPAVKGLIGAVLGIDKTEIYRNTLDLKIGIQVLSPVRKDMQVLKLVSMK
AEKDLFNFPVNAEFLRDPEYRIFVSWLPDKLDELEDRLQNQMPIFTPYLGVSEYIAKLDYEKRVNAELLTKSSSIDSLVP
SRFIDLQHSDYHIFTDNIPVSNNEKREYISYEKILFAFREDDTCKKEIACSLMGNLKRDVYKVDENIVFFFE

Sequences:

>Translated_232_residues
MDCLVFRAKSGYAKFRKPYTTTSALTFLCIHPPAVKGLIGAVLGIDKTEIYRNTLDLKIGIQVLSPVRKDMQVLKLVSMK
AEKDLFNFPVNAEFLRDPEYRIFVSWLPDKLDELEDRLQNQMPIFTPYLGVSEYIAKLDYEKRVNAELLTKSSSIDSLVP
SRFIDLQHSDYHIFTDNIPVSNNEKREYISYEKILFAFREDDTCKKEIACSLMGNLKRDVYKVDENIVFFFE
>Mature_232_residues
MDCLVFRAKSGYAKFRKPYTTTSALTFLCIHPPAVKGLIGAVLGIDKTEIYRNTLDLKIGIQVLSPVRKDMQVLKLVSMK
AEKDLFNFPVNAEFLRDPEYRIFVSWLPDKLDELEDRLQNQMPIFTPYLGVSEYIAKLDYEKRVNAELLTKSSSIDSLVP
SRFIDLQHSDYHIFTDNIPVSNNEKREYISYEKILFAFREDDTCKKEIACSLMGNLKRDVYKVDENIVFFFE

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26949; Mature: 26949

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCLVFRAKSGYAKFRKPYTTTSALTFLCIHPPAVKGLIGAVLGIDKTEIYRNTLDLKIG
CCEEEEECCCCHHHHCCCCCCHHHEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHEEH
IQVLSPVRKDMQVLKLVSMKAEKDLFNFPVNAEFLRDPEYRIFVSWLPDKLDELEDRLQN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEECCHHHHHHHHHHHH
QMPIFTPYLGVSEYIAKLDYEKRVNAELLTKSSSIDSLVPSRFIDLQHSDYHIFTDNIPV
CCCCCCCCCCHHHHHHHCCHHHHCCHHHHHCCCCHHHHHHHHHEECCCCCEEEEECCCCC
SNNEKREYISYEKILFAFREDDTCKKEIACSLMGNLKRDVYKVDENIVFFFE
CCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEC
>Mature Secondary Structure
MDCLVFRAKSGYAKFRKPYTTTSALTFLCIHPPAVKGLIGAVLGIDKTEIYRNTLDLKIG
CCEEEEECCCCHHHHCCCCCCHHHEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHEEH
IQVLSPVRKDMQVLKLVSMKAEKDLFNFPVNAEFLRDPEYRIFVSWLPDKLDELEDRLQN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEECCHHHHHHHHHHHH
QMPIFTPYLGVSEYIAKLDYEKRVNAELLTKSSSIDSLVPSRFIDLQHSDYHIFTDNIPV
CCCCCCCCCCHHHHHHHCCHHHHCCHHHHHCCCCHHHHHHHHHEECCCCCEEEEECCCCC
SNNEKREYISYEKILFAFREDDTCKKEIACSLMGNLKRDVYKVDENIVFFFE
CCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA