Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226637
Identifier: 21226637
GI number: 21226637
Start: 665572
End: 665859
Strand: Reverse
Name: 21226637
Synonym: MM_0535
Alternate gene names: NA
Gene position: 665859-665572 (Counterclockwise)
Preceding gene: 21226638
Following gene: 21226636
Centisome position: 16.25
GC content: 37.85
Gene sequence:
>288_bases ATGTCCAGAAAATACAGCAATAAAACAACCCATTTCGTCCTCCATGATGACGGTACATTCGACGTTTATATGAATAAAAA ATTCAAAGAATGCGGGATATATGAGGAAACCCCTGATATTATAAAACTCGACTATTACAAACACACTTCAATCTTCCAGA AAGAGGAAGGGTGTTTAATTTCTGAGAACTGCAGAATCTGGGTAGAAGACAGAATAATGAACGTCCCTGGCGGTATTCTG AATAACGGGGTTTTTATAGCCAATAATGACAGCGGGAATACTACCTAA
Upstream 100 bases:
>100_bases GACAAGCATATTGAAAAAAATGGCTGAAAAAACAGATTGATAAAGATGGCTAAAAAAGCAGATCGTGCAGCAGTTTAACA GTTAAAATGTGTGATCCAAC
Downstream 100 bases:
>100_bases GGGTGCGGAAAAATAAGAAAAAACTGAAAGCCAAATCCAGTTTTTAAAGGGATAAAAGTAATCCCGTAGCTTTTTTAATA TCTAATTTTTGTCTTCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MSRKYSNKTTHFVLHDDGTFDVYMNKKFKECGIYEETPDIIKLDYYKHTSIFQKEEGCLISENCRIWVEDRIMNVPGGIL NNGVFIANNDSGNTT
Sequences:
>Translated_95_residues MSRKYSNKTTHFVLHDDGTFDVYMNKKFKECGIYEETPDIIKLDYYKHTSIFQKEEGCLISENCRIWVEDRIMNVPGGIL NNGVFIANNDSGNTT >Mature_94_residues SRKYSNKTTHFVLHDDGTFDVYMNKKFKECGIYEETPDIIKLDYYKHTSIFQKEEGCLISENCRIWVEDRIMNVPGGILN NGVFIANNDSGNTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11004; Mature: 10872
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKYSNKTTHFVLHDDGTFDVYMNKKFKECGIYEETPDIIKLDYYKHTSIFQKEEGCLI CCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCEE SENCRIWVEDRIMNVPGGILNNGVFIANNDSGNTT CCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure SRKYSNKTTHFVLHDDGTFDVYMNKKFKECGIYEETPDIIKLDYYKHTSIFQKEEGCLI CCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCEE SENCRIWVEDRIMNVPGGILNNGVFIANNDSGNTT CCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA