Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226638

Identifier: 21226638

GI number: 21226638

Start: 666425

End: 667063

Strand: Reverse

Name: 21226638

Synonym: MM_0536

Alternate gene names: NA

Gene position: 667063-666425 (Counterclockwise)

Preceding gene: 21226642

Following gene: 21226637

Centisome position: 16.28

GC content: 42.88

Gene sequence:

>639_bases
ATGTTGAGAAAACTAATTTTAGCGATCTTAATAACAACCCTGCTAATAGGGACAGCCTCTGCTGCAACCCTTTATGTAGG
CAGTACAGCCAAATACAAGACTATCCAGAGCGCTGTGAATGCAGCAAGCGACGGAGATACGATCAAAGTAGCAAGTGGAA
CCTATAATGAATATGTTTCCATCTCCGGGAAATTCATCAACGTATATGGGACAAGCTACCCAAAAATGAACGGGTTCAGG
ATAACTCAGGGGGGAGCGGTTATCAACGGATTCAATATCCAGAAGAACGGGGTCGATTTCCAGGGTGCAGGCAATAATAA
TACTGTCCGTAATAATTATTTCTATAACTGTGGTGTTAGCATCACAGGGCTAACCTGCAGCCAGAATACTATTATGAATA
ATCAGATAACTAACGGAACGGTCACCCTGTGTGAAACCTGGGATAACGTGGTCAAGGGCAATACAATTACAAAAGCCAGA
ATCGGACTCTATATGTACGAGGGTGCGACCTGCCCGACCATTACCGGAAATACATTCTCTTACTGTGATATTGGTGTGAA
GCTTCCAGCGGTTCCTCCGGGGATGATAGGAAATAAGTACATCGGAAACAGGATAAACATAAAAATAGCTGATTATTAA

Upstream 100 bases:

>100_bases
TTCTTTATTTAACAGGAGAGTACTTGCATGTGGAGGGGAACTTCATCAATAACTTTAAATTGTAACCCATCTTTCTTTAT
TTAACAGGAGAGTAATTAAT

Downstream 100 bases:

>100_bases
ATAAATGGGTCGGGGGGGCCATTTATTTAAGACAATAGTTATTTTTTCCGTTACCTGTTTACTTACATGTTTACTTACAT
GTTCAGCTACTTATTTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MLRKLILAILITTLLIGTASAATLYVGSTAKYKTIQSAVNAASDGDTIKVASGTYNEYVSISGKFINVYGTSYPKMNGFR
ITQGGAVINGFNIQKNGVDFQGAGNNNTVRNNYFYNCGVSITGLTCSQNTIMNNQITNGTVTLCETWDNVVKGNTITKAR
IGLYMYEGATCPTITGNTFSYCDIGVKLPAVPPGMIGNKYIGNRINIKIADY

Sequences:

>Translated_212_residues
MLRKLILAILITTLLIGTASAATLYVGSTAKYKTIQSAVNAASDGDTIKVASGTYNEYVSISGKFINVYGTSYPKMNGFR
ITQGGAVINGFNIQKNGVDFQGAGNNNTVRNNYFYNCGVSITGLTCSQNTIMNNQITNGTVTLCETWDNVVKGNTITKAR
IGLYMYEGATCPTITGNTFSYCDIGVKLPAVPPGMIGNKYIGNRINIKIADY
>Mature_212_residues
MLRKLILAILITTLLIGTASAATLYVGSTAKYKTIQSAVNAASDGDTIKVASGTYNEYVSISGKFINVYGTSYPKMNGFR
ITQGGAVINGFNIQKNGVDFQGAGNNNTVRNNYFYNCGVSITGLTCSQNTIMNNQITNGTVTLCETWDNVVKGNTITKAR
IGLYMYEGATCPTITGNTFSYCDIGVKLPAVPPGMIGNKYIGNRINIKIADY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22711; Mature: 22711

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKLILAILITTLLIGTASAATLYVGSTAKYKTIQSAVNAASDGDTIKVASGTYNEYVS
CHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEE
ISGKFINVYGTSYPKMNGFRITQGGAVINGFNIQKNGVDFQGAGNNNTVRNNYFYNCGVS
ECCEEEEEEECCCCCCCCEEEECCCEEEECCEEECCCCEEEECCCCCCEECCEEEECCCE
ITGLTCSQNTIMNNQITNGTVTLCETWDNVVKGNTITKARIGLYMYEGATCPTITGNTFS
EEEEEECCCEEECCCCCCCEEEEEECCCHHHCCCCEEEEEEEEEEECCCCCCEEECCCEE
YCDIGVKLPAVPPGMIGNKYIGNRINIKIADY
EEEECEECCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MLRKLILAILITTLLIGTASAATLYVGSTAKYKTIQSAVNAASDGDTIKVASGTYNEYVS
CHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEE
ISGKFINVYGTSYPKMNGFRITQGGAVINGFNIQKNGVDFQGAGNNNTVRNNYFYNCGVS
ECCEEEEEEECCCCCCCCEEEECCCEEEECCEEECCCCEEEECCCCCCEECCEEEECCCE
ITGLTCSQNTIMNNQITNGTVTLCETWDNVVKGNTITKARIGLYMYEGATCPTITGNTFS
EEEEEECCCEEECCCCCCCEEEEEECCCHHHCCCCEEEEEEEEEEECCCCCCEEECCCEE
YCDIGVKLPAVPPGMIGNKYIGNRINIKIADY
EEEECEECCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA