Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226638
Identifier: 21226638
GI number: 21226638
Start: 666425
End: 667063
Strand: Reverse
Name: 21226638
Synonym: MM_0536
Alternate gene names: NA
Gene position: 667063-666425 (Counterclockwise)
Preceding gene: 21226642
Following gene: 21226637
Centisome position: 16.28
GC content: 42.88
Gene sequence:
>639_bases ATGTTGAGAAAACTAATTTTAGCGATCTTAATAACAACCCTGCTAATAGGGACAGCCTCTGCTGCAACCCTTTATGTAGG CAGTACAGCCAAATACAAGACTATCCAGAGCGCTGTGAATGCAGCAAGCGACGGAGATACGATCAAAGTAGCAAGTGGAA CCTATAATGAATATGTTTCCATCTCCGGGAAATTCATCAACGTATATGGGACAAGCTACCCAAAAATGAACGGGTTCAGG ATAACTCAGGGGGGAGCGGTTATCAACGGATTCAATATCCAGAAGAACGGGGTCGATTTCCAGGGTGCAGGCAATAATAA TACTGTCCGTAATAATTATTTCTATAACTGTGGTGTTAGCATCACAGGGCTAACCTGCAGCCAGAATACTATTATGAATA ATCAGATAACTAACGGAACGGTCACCCTGTGTGAAACCTGGGATAACGTGGTCAAGGGCAATACAATTACAAAAGCCAGA ATCGGACTCTATATGTACGAGGGTGCGACCTGCCCGACCATTACCGGAAATACATTCTCTTACTGTGATATTGGTGTGAA GCTTCCAGCGGTTCCTCCGGGGATGATAGGAAATAAGTACATCGGAAACAGGATAAACATAAAAATAGCTGATTATTAA
Upstream 100 bases:
>100_bases TTCTTTATTTAACAGGAGAGTACTTGCATGTGGAGGGGAACTTCATCAATAACTTTAAATTGTAACCCATCTTTCTTTAT TTAACAGGAGAGTAATTAAT
Downstream 100 bases:
>100_bases ATAAATGGGTCGGGGGGGCCATTTATTTAAGACAATAGTTATTTTTTCCGTTACCTGTTTACTTACATGTTTACTTACAT GTTCAGCTACTTATTTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MLRKLILAILITTLLIGTASAATLYVGSTAKYKTIQSAVNAASDGDTIKVASGTYNEYVSISGKFINVYGTSYPKMNGFR ITQGGAVINGFNIQKNGVDFQGAGNNNTVRNNYFYNCGVSITGLTCSQNTIMNNQITNGTVTLCETWDNVVKGNTITKAR IGLYMYEGATCPTITGNTFSYCDIGVKLPAVPPGMIGNKYIGNRINIKIADY
Sequences:
>Translated_212_residues MLRKLILAILITTLLIGTASAATLYVGSTAKYKTIQSAVNAASDGDTIKVASGTYNEYVSISGKFINVYGTSYPKMNGFR ITQGGAVINGFNIQKNGVDFQGAGNNNTVRNNYFYNCGVSITGLTCSQNTIMNNQITNGTVTLCETWDNVVKGNTITKAR IGLYMYEGATCPTITGNTFSYCDIGVKLPAVPPGMIGNKYIGNRINIKIADY >Mature_212_residues MLRKLILAILITTLLIGTASAATLYVGSTAKYKTIQSAVNAASDGDTIKVASGTYNEYVSISGKFINVYGTSYPKMNGFR ITQGGAVINGFNIQKNGVDFQGAGNNNTVRNNYFYNCGVSITGLTCSQNTIMNNQITNGTVTLCETWDNVVKGNTITKAR IGLYMYEGATCPTITGNTFSYCDIGVKLPAVPPGMIGNKYIGNRINIKIADY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22711; Mature: 22711
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKLILAILITTLLIGTASAATLYVGSTAKYKTIQSAVNAASDGDTIKVASGTYNEYVS CHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEE ISGKFINVYGTSYPKMNGFRITQGGAVINGFNIQKNGVDFQGAGNNNTVRNNYFYNCGVS ECCEEEEEEECCCCCCCCEEEECCCEEEECCEEECCCCEEEECCCCCCEECCEEEECCCE ITGLTCSQNTIMNNQITNGTVTLCETWDNVVKGNTITKARIGLYMYEGATCPTITGNTFS EEEEEECCCEEECCCCCCCEEEEEECCCHHHCCCCEEEEEEEEEEECCCCCCEEECCCEE YCDIGVKLPAVPPGMIGNKYIGNRINIKIADY EEEECEECCCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MLRKLILAILITTLLIGTASAATLYVGSTAKYKTIQSAVNAASDGDTIKVASGTYNEYVS CHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEE ISGKFINVYGTSYPKMNGFRITQGGAVINGFNIQKNGVDFQGAGNNNTVRNNYFYNCGVS ECCEEEEEEECCCCCCCCEEEECCCEEEECCEEECCCCEEEECCCCCCEECCEEEECCCE ITGLTCSQNTIMNNQITNGTVTLCETWDNVVKGNTITKARIGLYMYEGATCPTITGNTFS EEEEEECCCEEECCCCCCCEEEEEECCCHHHCCCCEEEEEEEEEEECCCCCCEEECCCEE YCDIGVKLPAVPPGMIGNKYIGNRINIKIADY EEEECEECCCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA