Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226622
Identifier: 21226622
GI number: 21226622
Start: 648444
End: 650030
Strand: Reverse
Name: 21226622
Synonym: MM_0520
Alternate gene names: NA
Gene position: 650030-648444 (Counterclockwise)
Preceding gene: 21226625
Following gene: 21226621
Centisome position: 15.87
GC content: 36.55
Gene sequence:
>1587_bases ATGAATGAAAATGATTTTGAATTCCTGTATGAAAATATCCATAAGTCTTTTTTATACTTTGCAGATAAGCACTCTTTAGC ACTGCTTCAGACAGGGCAATGTGTAATGACACTTTGTTTCGGGTTCAGAGATGCTGAAAGCCTTGAAACAGCTAAAAAAT TTGTAGAGCATAACGGGCATGATATGCATTTATTCAAAAGAACATTTGTTGAGACGTGGCTCATAGATTTGAATTCTCTG GAAATTATTCAGGGCACGGGCATTCTCAGAAAAGCAGGTCAGACCATAACAGAAAATGCTGACGAGCTTTTGAAAAAAAA TAGGGCTTCAAACTTAAACGGAGCCAGTTTGTCTCCGGATGCATTGACAAAGCCTTCTTCTTTTATCCAGTACGTCAGGG AATTCGATTCCAGAATCCGGGAAGGTAAAGTCAGGGTACCGGAATGCTGGGTTGAAAGGTTCAGACCTGAATGCATCAAC CTGAAAATACTCTCATGTAAGAAGCAGATCCAGAAAATTGAAACTAAAAAAGAGGAATACGAACGAAAAACAGGACAGGC AGTACTTTCAAGGTATAAAAACTCGAGATATAAAGAAGATATTTCCAGACAGGGCTTTTCTGAAGACAGATTTTCCAAAG AAGGTTCTCCTAAAGAAAGCTTTCCTATAGAAAACTTTTCAAAAGAGAATTCCTTCATAGATAGCCTTTCTTTTGATGGC TTTGATAAAGAGATTGAGTTTGTACTGAAGAAACAGAAATATCTTGATTCAATTGAGGAAAACATATCTCTCATTAAAAA AATGAGGTTCGAATGGGAAGAATCCCTGACTAGAGTAAGAGAATTACACGGGGAATTTAAAATACTGGACCGGGAATATA AAAACTCCTGTTACCAGCTCACGAAAACACTGTTCGAACAGGAGATGGAAGCCGTCAAAAATGATCCTGATTTAAAAAGA ATATTTGCTGACATGCTTCAAACACTGTCTGAAATCAATAACAGAAACAGGAAAATTTCGGAACTGCAAAACAAAAAAAC CGGATTTGCCGACAGGGTAAAAACCGAAACAAAAATAATATATTTAAAAGGACTTAATCAGGTTGATGACTGGAATAAGG ATAAAAGATGGGTTGAAATGGGAGAAAAGGTCGTAAATTCCTCGTCTTCCGCAGCACATTTGAGTTCATCAGGAAAGATT ATTAAAACTATTGAAAAAATCAAAAATGAAAAAGAAATTCTGAACGATAAACATTTCAAGGAAATAAAAGTCCAGAGCCG GATTAAAGAAAATATAAAAAGTATGTCGGATAAAAATGAGATAAATATGTCAGGTAGGAGTGAACATTCCTACCCCTGGC TGGAGCTGGAAAAAGAGCTTACTGAAAAAGCCCTGATGAGTAAACAGGAACTTTCAACACTATTTTTATCTTTGGGGAAA TCTTTCCGAAAAATCTCACAGAAATATTTCAGTTCTGACCTTCAAACTCTGGATAACGAACTAAGGGCCTGCGAATCTCA AATAATGGAGCTTGAGTACGAAATAGACGGTTTGAAGGCAGAGTTAAGGAAGCTTACTTATGTTTGA
Upstream 100 bases:
>100_bases GTTCTATTATCAAAAAAGCTAAGTGAAAAGGATTTTCATTTTTTGGGCATGTTATTCCAAGAATATCATGTGTGTTTTTT GTGCAAAGGTAACCGATTTT
Downstream 100 bases:
>100_bases TATCTGGAAGCCGGAAATATTTCATGGCCGGAGAAAAGAGAAGAATTTTTTCGAAGGCTGGTATTTTAAGGTGGTGGACC ACAGCGAAAAGAATGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MNENDFEFLYENIHKSFLYFADKHSLALLQTGQCVMTLCFGFRDAESLETAKKFVEHNGHDMHLFKRTFVETWLIDLNSL EIIQGTGILRKAGQTITENADELLKKNRASNLNGASLSPDALTKPSSFIQYVREFDSRIREGKVRVPECWVERFRPECIN LKILSCKKQIQKIETKKEEYERKTGQAVLSRYKNSRYKEDISRQGFSEDRFSKEGSPKESFPIENFSKENSFIDSLSFDG FDKEIEFVLKKQKYLDSIEENISLIKKMRFEWEESLTRVRELHGEFKILDREYKNSCYQLTKTLFEQEMEAVKNDPDLKR IFADMLQTLSEINNRNRKISELQNKKTGFADRVKTETKIIYLKGLNQVDDWNKDKRWVEMGEKVVNSSSSAAHLSSSGKI IKTIEKIKNEKEILNDKHFKEIKVQSRIKENIKSMSDKNEINMSGRSEHSYPWLELEKELTEKALMSKQELSTLFLSLGK SFRKISQKYFSSDLQTLDNELRACESQIMELEYEIDGLKAELRKLTYV
Sequences:
>Translated_528_residues MNENDFEFLYENIHKSFLYFADKHSLALLQTGQCVMTLCFGFRDAESLETAKKFVEHNGHDMHLFKRTFVETWLIDLNSL EIIQGTGILRKAGQTITENADELLKKNRASNLNGASLSPDALTKPSSFIQYVREFDSRIREGKVRVPECWVERFRPECIN LKILSCKKQIQKIETKKEEYERKTGQAVLSRYKNSRYKEDISRQGFSEDRFSKEGSPKESFPIENFSKENSFIDSLSFDG FDKEIEFVLKKQKYLDSIEENISLIKKMRFEWEESLTRVRELHGEFKILDREYKNSCYQLTKTLFEQEMEAVKNDPDLKR IFADMLQTLSEINNRNRKISELQNKKTGFADRVKTETKIIYLKGLNQVDDWNKDKRWVEMGEKVVNSSSSAAHLSSSGKI IKTIEKIKNEKEILNDKHFKEIKVQSRIKENIKSMSDKNEINMSGRSEHSYPWLELEKELTEKALMSKQELSTLFLSLGK SFRKISQKYFSSDLQTLDNELRACESQIMELEYEIDGLKAELRKLTYV >Mature_528_residues MNENDFEFLYENIHKSFLYFADKHSLALLQTGQCVMTLCFGFRDAESLETAKKFVEHNGHDMHLFKRTFVETWLIDLNSL EIIQGTGILRKAGQTITENADELLKKNRASNLNGASLSPDALTKPSSFIQYVREFDSRIREGKVRVPECWVERFRPECIN LKILSCKKQIQKIETKKEEYERKTGQAVLSRYKNSRYKEDISRQGFSEDRFSKEGSPKESFPIENFSKENSFIDSLSFDG FDKEIEFVLKKQKYLDSIEENISLIKKMRFEWEESLTRVRELHGEFKILDREYKNSCYQLTKTLFEQEMEAVKNDPDLKR IFADMLQTLSEINNRNRKISELQNKKTGFADRVKTETKIIYLKGLNQVDDWNKDKRWVEMGEKVVNSSSSAAHLSSSGKI IKTIEKIKNEKEILNDKHFKEIKVQSRIKENIKSMSDKNEINMSGRSEHSYPWLELEKELTEKALMSKQELSTLFLSLGK SFRKISQKYFSSDLQTLDNELRACESQIMELEYEIDGLKAELRKLTYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61936; Mature: 61936
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENDFEFLYENIHKSFLYFADKHSLALLQTGQCVMTLCFGFRDAESLETAKKFVEHNGH CCCCHHHHHHHHHHHHHHHHHCCCCEEHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC DMHLFKRTFVETWLIDLNSLEIIQGTGILRKAGQTITENADELLKKNRASNLNGASLSPD HHHHHHHHHHHHHHHCCCCHHHECCCHHHHHHCCHHHCCHHHHHHHHCCCCCCCCCCCCH ALTKPSSFIQYVREFDSRIREGKVRVPECWVERFRPECINLKILSCKKQIQKIETKKEEY HCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHCEEHHHHHHHHHHHHHHHHHH ERKTGQAVLSRYKNSRYKEDISRQGFSEDRFSKEGSPKESFPIENFSKENSFIDSLSFDG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC FDKEIEFVLKKQKYLDSIEENISLIKKMRFEWEESLTRVRELHGEFKILDREYKNSCYQL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKTLFEQEMEAVKNDPDLKRIFADMLQTLSEINNRNRKISELQNKKTGFADRVKTETKII HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCCEEE YLKGLNQVDDWNKDKRWVEMGEKVVNSSSSAAHLSSSGKIIKTIEKIKNEKEILNDKHFK EEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHH EIKVQSRIKENIKSMSDKNEINMSGRSEHSYPWLELEKELTEKALMSKQELSTLFLSLGK HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFRKISQKYFSSDLQTLDNELRACESQIMELEYEIDGLKAELRKLTYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNENDFEFLYENIHKSFLYFADKHSLALLQTGQCVMTLCFGFRDAESLETAKKFVEHNGH CCCCHHHHHHHHHHHHHHHHHCCCCEEHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC DMHLFKRTFVETWLIDLNSLEIIQGTGILRKAGQTITENADELLKKNRASNLNGASLSPD HHHHHHHHHHHHHHHCCCCHHHECCCHHHHHHCCHHHCCHHHHHHHHCCCCCCCCCCCCH ALTKPSSFIQYVREFDSRIREGKVRVPECWVERFRPECINLKILSCKKQIQKIETKKEEY HCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHCEEHHHHHHHHHHHHHHHHHH ERKTGQAVLSRYKNSRYKEDISRQGFSEDRFSKEGSPKESFPIENFSKENSFIDSLSFDG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC FDKEIEFVLKKQKYLDSIEENISLIKKMRFEWEESLTRVRELHGEFKILDREYKNSCYQL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKTLFEQEMEAVKNDPDLKRIFADMLQTLSEINNRNRKISELQNKKTGFADRVKTETKII HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCCEEE YLKGLNQVDDWNKDKRWVEMGEKVVNSSSSAAHLSSSGKIIKTIEKIKNEKEILNDKHFK EEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHH EIKVQSRIKENIKSMSDKNEINMSGRSEHSYPWLELEKELTEKALMSKQELSTLFLSLGK HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFRKISQKYFSSDLQTLDNELRACESQIMELEYEIDGLKAELRKLTYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA