Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226617
Identifier: 21226617
GI number: 21226617
Start: 640248
End: 641360
Strand: Reverse
Name: 21226617
Synonym: MM_0515
Alternate gene names: NA
Gene position: 641360-640248 (Counterclockwise)
Preceding gene: 21226618
Following gene: 21226616
Centisome position: 15.66
GC content: 48.07
Gene sequence:
>1113_bases ATGACTCAAAAAGAGATTTCAATTATCCATCCCCGCCCGAGTTCAATCGTTGCGGCTCTTTATACTCTCAGGGACTTAAA CGTAGATGTTGCAATCCTGCACGGGCCTCCAGGCTGTTCTTTCAAACATGCAAGGCTGCTTGAAGAAGACGGGATCCATG TGGTAACCACAGGGCTTGACGAAAACGGTTTTGTGTTCGGTGGGCACGATAAGCTTGTGCAGGTCATCAATAAATCCATA GAGTTATTCAACCCGAAAATCCTGGGCGTTGTCGGGACCTGCGCCAGCATGATCATAGGAGAGGAAATGCACGAAGCCGT GCTTGAAGCAAACCCGGACATCCCTGTAATTGAAGTCGAAGTTCACGCAGGCTATCACAACAACACAAAAGGCGTGATTT TTGCTCTGGAATCCGCACTCGATGCCGGGATAATTGACCATAAAGAGTTCGAGCGCCAGGAATACCTCCTCCAGAAAGCC ACAGAGGTTGAAAAGAAATTCGGGGCTGCAAGCAAAGAGTACCTTGCTCCCTCCAGGGGCGACGTCAAATATAAAGTTGC AAAGAGGCTTGTTGAACTCCTGAAGGAAGGCAAAAAAGGCCTGGTCATAATGAACGCCAAAAAAGAAACCGGCTACATGT TTGCAGATATTACCCTTGCAGTCAATGAGGTTGCAGAGGCTCTCGGGAAAAAGGAAAACCTGGTAAACATGGCAAACATT GACCCTGAGCTCGGGCTTCCCCGTGTCAGGCAGCATGCAGAATATATTATGCGGGACTTCAAAGCCCACGGGGTCGAGAT TCACGAGATAATCGGTGGCATGGACGAATACCCTGTTGCAGGGGAAAAGGTCAGCGAGCTGATAAAAGAAAAATACAGTG ATTATGATTTTGCCGTTATCACAGGTGTCCCACATGCAGTCCCCATGGAAAACATAGGGCATATGGAATTGATCTCGATC ACAAATGGTCCAAGGCAGGTTCTCCCATTAAAAGAAATGGGACATGAGCATGTTATGGTTGAGATTGACCTCCACCCAAA GACCCTTGGAGTAAGCCAGATCGTGGAGTCCGAATTCGGAGCCACATTAAGGGAAGTTGCAAAGGAAGCCTGA
Upstream 100 bases:
>100_bases CACCTTTCCCGTTAATGCAGGGGTAATTGTCCTGCGGGACTCCGAAATTTTCCGGATGGAACCCATACCGGTATTCGTAT AATCAGAAAGAGGATTTGTC
Downstream 100 bases:
>100_bases AATGGGAAAGAAAGACCGGATAAAAAACCAGAGTCTATGATAAATCAGGATAAAGCCGGAAAATATTCAATAGCGGGAGG AAGATCCTTTGAAAAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MTQKEISIIHPRPSSIVAALYTLRDLNVDVAILHGPPGCSFKHARLLEEDGIHVVTTGLDENGFVFGGHDKLVQVINKSI ELFNPKILGVVGTCASMIIGEEMHEAVLEANPDIPVIEVEVHAGYHNNTKGVIFALESALDAGIIDHKEFERQEYLLQKA TEVEKKFGAASKEYLAPSRGDVKYKVAKRLVELLKEGKKGLVIMNAKKETGYMFADITLAVNEVAEALGKKENLVNMANI DPELGLPRVRQHAEYIMRDFKAHGVEIHEIIGGMDEYPVAGEKVSELIKEKYSDYDFAVITGVPHAVPMENIGHMELISI TNGPRQVLPLKEMGHEHVMVEIDLHPKTLGVSQIVESEFGATLREVAKEA
Sequences:
>Translated_370_residues MTQKEISIIHPRPSSIVAALYTLRDLNVDVAILHGPPGCSFKHARLLEEDGIHVVTTGLDENGFVFGGHDKLVQVINKSI ELFNPKILGVVGTCASMIIGEEMHEAVLEANPDIPVIEVEVHAGYHNNTKGVIFALESALDAGIIDHKEFERQEYLLQKA TEVEKKFGAASKEYLAPSRGDVKYKVAKRLVELLKEGKKGLVIMNAKKETGYMFADITLAVNEVAEALGKKENLVNMANI DPELGLPRVRQHAEYIMRDFKAHGVEIHEIIGGMDEYPVAGEKVSELIKEKYSDYDFAVITGVPHAVPMENIGHMELISI TNGPRQVLPLKEMGHEHVMVEIDLHPKTLGVSQIVESEFGATLREVAKEA >Mature_369_residues TQKEISIIHPRPSSIVAALYTLRDLNVDVAILHGPPGCSFKHARLLEEDGIHVVTTGLDENGFVFGGHDKLVQVINKSIE LFNPKILGVVGTCASMIIGEEMHEAVLEANPDIPVIEVEVHAGYHNNTKGVIFALESALDAGIIDHKEFERQEYLLQKAT EVEKKFGAASKEYLAPSRGDVKYKVAKRLVELLKEGKKGLVIMNAKKETGYMFADITLAVNEVAEALGKKENLVNMANID PELGLPRVRQHAEYIMRDFKAHGVEIHEIIGGMDEYPVAGEKVSELIKEKYSDYDFAVITGVPHAVPMENIGHMELISIT NGPRQVLPLKEMGHEHVMVEIDLHPKTLGVSQIVESEFGATLREVAKEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1423 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017675 - InterPro: IPR000510 [H]
Pfam domain/function: PF00148 Oxidored_nitro [H]
EC number: NA
Molecular weight: Translated: 40834; Mature: 40702
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKEISIIHPRPSSIVAALYTLRDLNVDVAILHGPPGCSFKHARLLEEDGIHVVTTGLD CCCCCEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCCCEEEEECCC ENGFVFGGHDKLVQVINKSIELFNPKILGVVGTCASMIIGEEMHEAVLEANPDIPVIEVE CCCCEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VHAGYHNNTKGVIFALESALDAGIIDHKEFERQEYLLQKATEVEKKFGAASKEYLAPSRG EECCCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC DVKYKVAKRLVELLKEGKKGLVIMNAKKETGYMFADITLAVNEVAEALGKKENLVNMANI CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCHHCCEEHHCC DPELGLPRVRQHAEYIMRDFKAHGVEIHEIIGGMDEYPVAGEKVSELIKEKYSDYDFAVI CCCCCCHHHHHHHHHHHHHHHHCCEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEE TGVPHAVPMENIGHMELISITNGPRQVLPLKEMGHEHVMVEIDLHPKTLGVSQIVESEFG ECCCCCCCCCCCCCEEEEEECCCCHHCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHH ATLREVAKEA HHHHHHHHCC >Mature Secondary Structure TQKEISIIHPRPSSIVAALYTLRDLNVDVAILHGPPGCSFKHARLLEEDGIHVVTTGLD CCCCEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCCCEEEEECCC ENGFVFGGHDKLVQVINKSIELFNPKILGVVGTCASMIIGEEMHEAVLEANPDIPVIEVE CCCCEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VHAGYHNNTKGVIFALESALDAGIIDHKEFERQEYLLQKATEVEKKFGAASKEYLAPSRG EECCCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC DVKYKVAKRLVELLKEGKKGLVIMNAKKETGYMFADITLAVNEVAEALGKKENLVNMANI CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCHHCCEEHHCC DPELGLPRVRQHAEYIMRDFKAHGVEIHEIIGGMDEYPVAGEKVSELIKEKYSDYDFAVI CCCCCCHHHHHHHHHHHHHHHHCCEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEE TGVPHAVPMENIGHMELISITNGPRQVLPLKEMGHEHVMVEIDLHPKTLGVSQIVESEFG ECCCCCCCCCCCCCEEEEEECCCCHHCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHH ATLREVAKEA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]