Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226613
Identifier: 21226613
GI number: 21226613
Start: 635932
End: 636327
Strand: Reverse
Name: 21226613
Synonym: MM_0511
Alternate gene names: NA
Gene position: 636327-635932 (Counterclockwise)
Preceding gene: 21226614
Following gene: 21226612
Centisome position: 15.53
GC content: 46.21
Gene sequence:
>396_bases ATGTGGGATATTATTGCAGTGGACATTTCAGGAAGGCACAGGATAAAAGGCGGCTACTACATGGTCTGTGCAGCAGCAGC TCTCACTGTTTCTGCTGACCACATAGAAAAGGTAAAACAGGTAAAAATTCTTCCAGTCTGGCTTAAAAAAGCTCCAGGTC TCCTTGATATTGTCCAGTTAATTGAGGATACGGCTGACCAGCTTTCCTTTGAGGGCACGATTGTGGCAGAAAAAGGGGAT ATGTATAACCAGCCCCTCTGGGTGCCTGAAAGCATGTTTTCGCAGGCATTTAAGTACCAGGAGTCCATGGCTGAGAGGAG AGCTATCGAGCTTGCCCACCACATCTCTCTGAGTGCGCGAAATTTACTTATTAAAGAACTCAACATCGAGGCGTAA
Upstream 100 bases:
>100_bases CATATTGCTTCTGTATTATTTCTTAAAGAACGAATGTGTTTTATTGACTTTACTTCTGGCTTGTTACGTTTTCATCCCGT AAAGAGGGTGAAGTATAAAA
Downstream 100 bases:
>100_bases AAATTCCAGCAGATAAGAAAACAGAGGCTGAAAGCCGGGTAATTTTAGTAAAAAGGACAAACCCGCGGGCTGACCCAGAA CGCAGTGAATACCTCTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MWDIIAVDISGRHRIKGGYYMVCAAAALTVSADHIEKVKQVKILPVWLKKAPGLLDIVQLIEDTADQLSFEGTIVAEKGD MYNQPLWVPESMFSQAFKYQESMAERRAIELAHHISLSARNLLIKELNIEA
Sequences:
>Translated_131_residues MWDIIAVDISGRHRIKGGYYMVCAAAALTVSADHIEKVKQVKILPVWLKKAPGLLDIVQLIEDTADQLSFEGTIVAEKGD MYNQPLWVPESMFSQAFKYQESMAERRAIELAHHISLSARNLLIKELNIEA >Mature_131_residues MWDIIAVDISGRHRIKGGYYMVCAAAALTVSADHIEKVKQVKILPVWLKKAPGLLDIVQLIEDTADQLSFEGTIVAEKGD MYNQPLWVPESMFSQAFKYQESMAERRAIELAHHISLSARNLLIKELNIEA
Specific function: Unknown
COG id: COG4921
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14752; Mature: 14752
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWDIIAVDISGRHRIKGGYYMVCAAAALTVSADHIEKVKQVKILPVWLKKAPGLLDIVQL CCEEEEEEECCCEEECCCEEHEEHHHHHHCCHHHHHHHHHHHHEEEHHHCCCCHHHHHHH IEDTADQLSFEGTIVAEKGDMYNQPLWVPESMFSQAFKYQESMAERRAIELAHHISLSAR HHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLIKELNIEA HHHHEECCCCC >Mature Secondary Structure MWDIIAVDISGRHRIKGGYYMVCAAAALTVSADHIEKVKQVKILPVWLKKAPGLLDIVQL CCEEEEEEECCCEEECCCEEHEEHHHHHHCCHHHHHHHHHHHHEEEHHHCCCCHHHHHHH IEDTADQLSFEGTIVAEKGDMYNQPLWVPESMFSQAFKYQESMAERRAIELAHHISLSAR HHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLIKELNIEA HHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA