Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226609
Identifier: 21226609
GI number: 21226609
Start: 630618
End: 631145
Strand: Reverse
Name: 21226609
Synonym: MM_0507
Alternate gene names: NA
Gene position: 631145-630618 (Counterclockwise)
Preceding gene: 21226610
Following gene: 21226608
Centisome position: 15.41
GC content: 45.27
Gene sequence:
>528_bases ATGGGTTATTCGCTTTCTGACCAGGAAGGCCTTCTGTTTGTCAGGAACGATTTTACATCTTCGGCTTACGAAGAATGCGA ATTTGTCTTCGGAAACATATTCCTGCCGGACACTGTCCAGGAACTCTTTTCCGGAGATAAAGTGCTGTTTTTAATGGTAT ACAGGAAAGAAACCCGGAGTCTTTTATTAGCCGAGCTTGAAGCAGACATCAGGTGCATGCTTGACCTGCCTCATGGGCTT TACTACTTTTTTGCGCTTGTTCTTGACGCAGGAGCCAGAAACCTTCCTGATTCCAGAATTTTTGCAATTGGCCTTCCCTG TAAAGAAAACATGAACCGTCCGGAGCGCGAGAAATTCTATCTCAAACATCCGGCTGACATCCTGGAATTCGTAGACCCTG CCCCTTTAGAAATTAAACGCGGGGGGCCTTTCTACCTTAATATGATTTTAGTAAGTGCCGAGAAAATCCCTGAATGCTCC CTTATTTTTTCCGAATTATGGCAAGAAGAACCCTCGCCTCCCCTTTGA
Upstream 100 bases:
>100_bases ATGTATAGGCATATTGTCCCGAATTGAGGCTAAGGCTCTTGACAGATTCTGGAAGGATACTTCTGCAGGCAAATATCCGA TAATTGACCTTGAAGGTAAT
Downstream 100 bases:
>100_bases AAAAAATAGTAAAAATAAATATATAGTTGCCAGCCCCAGTAATTTTGAATGCAGCTAAAAACCGAATATGGAAAGATAGA TCCCTATATTACAAAAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MGYSLSDQEGLLFVRNDFTSSAYEECEFVFGNIFLPDTVQELFSGDKVLFLMVYRKETRSLLLAELEADIRCMLDLPHGL YYFFALVLDAGARNLPDSRIFAIGLPCKENMNRPEREKFYLKHPADILEFVDPAPLEIKRGGPFYLNMILVSAEKIPECS LIFSELWQEEPSPPL
Sequences:
>Translated_175_residues MGYSLSDQEGLLFVRNDFTSSAYEECEFVFGNIFLPDTVQELFSGDKVLFLMVYRKETRSLLLAELEADIRCMLDLPHGL YYFFALVLDAGARNLPDSRIFAIGLPCKENMNRPEREKFYLKHPADILEFVDPAPLEIKRGGPFYLNMILVSAEKIPECS LIFSELWQEEPSPPL >Mature_174_residues GYSLSDQEGLLFVRNDFTSSAYEECEFVFGNIFLPDTVQELFSGDKVLFLMVYRKETRSLLLAELEADIRCMLDLPHGLY YFFALVLDAGARNLPDSRIFAIGLPCKENMNRPEREKFYLKHPADILEFVDPAPLEIKRGGPFYLNMILVSAEKIPECSL IFSELWQEEPSPPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20098; Mature: 19967
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYSLSDQEGLLFVRNDFTSSAYEECEFVFGNIFLPDTVQELFSGDKVLFLMVYRKETRS CCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEECCHHHHHHHCCCCEEEEEEEHHHHHH LLLAELEADIRCMLDLPHGLYYFFALVLDAGARNLPDSRIFAIGLPCKENMNRPEREKFY HHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHCCCCCHHHEE LKHPADILEFVDPAPLEIKRGGPFYLNMILVSAEKIPECSLIFSELWQEEPSPPL ECCCHHHHHHCCCCCEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GYSLSDQEGLLFVRNDFTSSAYEECEFVFGNIFLPDTVQELFSGDKVLFLMVYRKETRS CCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEECCHHHHHHHCCCCEEEEEEEHHHHHH LLLAELEADIRCMLDLPHGLYYFFALVLDAGARNLPDSRIFAIGLPCKENMNRPEREKFY HHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHCCCCCHHHEE LKHPADILEFVDPAPLEIKRGGPFYLNMILVSAEKIPECSLIFSELWQEEPSPPL ECCCHHHHHHCCCCCEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA