Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226608

Identifier: 21226608

GI number: 21226608

Start: 630204

End: 630569

Strand: Reverse

Name: 21226608

Synonym: MM_0506

Alternate gene names: NA

Gene position: 630569-630204 (Counterclockwise)

Preceding gene: 21226609

Following gene: 21226598

Centisome position: 15.39

GC content: 48.63

Gene sequence:

>366_bases
ATGCAGCTAAAAACCGAATATGGAAAGATAGATCCCTATATTACAAAAGACGGTTCAATAATCCGTGAACTCATGCACCC
CGCAATCCACGGAAATTCCGGACAGAGCCTTGCCGAAGCTACCGTGCCTGCCGGAGGACAAACAATGCTCCACAAACATG
CAGTGGCTGAGGAAATCTATCACATCACGGAAGGCTGCGGGATAATGACCCTCGGCGGGCAGGAGTTTGAAATCCGTAAA
GGAGATACCGTCTGTATTCTACCCGGAACTCCGCACAGGATAATGAACACCGGTGAAAAAGAACTGAAAATTCTCTGCTG
CTGTGCGCCGGCGTATTCGCATGAGGATACGGAATTGATGAAATGA

Upstream 100 bases:

>100_bases
CTCCCTTATTTTTTCCGAATTATGGCAAGAAGAACCCTCGCCTCCCCTTTGAAAAAAATAGTAAAAATAAATATATAGTT
GCCAGCCCCAGTAATTTTGA

Downstream 100 bases:

>100_bases
TCAGTGGTTTTCTTCTTTTGTCATTTTTACACCTGTCCATCGTAATTTTCAACCTTTCTCCACATACCACTCGTCCCTTG
CCTCCACAAGCGCCCTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MQLKTEYGKIDPYITKDGSIIRELMHPAIHGNSGQSLAEATVPAGGQTMLHKHAVAEEIYHITEGCGIMTLGGQEFEIRK
GDTVCILPGTPHRIMNTGEKELKILCCCAPAYSHEDTELMK

Sequences:

>Translated_121_residues
MQLKTEYGKIDPYITKDGSIIRELMHPAIHGNSGQSLAEATVPAGGQTMLHKHAVAEEIYHITEGCGIMTLGGQEFEIRK
GDTVCILPGTPHRIMNTGEKELKILCCCAPAYSHEDTELMK
>Mature_121_residues
MQLKTEYGKIDPYITKDGSIIRELMHPAIHGNSGQSLAEATVPAGGQTMLHKHAVAEEIYHITEGCGIMTLGGQEFEIRK
GDTVCILPGTPHRIMNTGEKELKILCCCAPAYSHEDTELMK

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 13251; Mature: 13251

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKTEYGKIDPYITKDGSIIRELMHPAIHGNSGQSLAEATVPAGGQTMLHKHAVAEEIY
CCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH
HITEGCGIMTLGGQEFEIRKGDTVCILPGTPHRIMNTGEKELKILCCCAPAYSHEDTELM
HHHCCCEEEEECCCEEEEECCCEEEEECCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCC
K
C
>Mature Secondary Structure
MQLKTEYGKIDPYITKDGSIIRELMHPAIHGNSGQSLAEATVPAGGQTMLHKHAVAEEIY
CCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH
HITEGCGIMTLGGQEFEIRKGDTVCILPGTPHRIMNTGEKELKILCCCAPAYSHEDTELM
HHHCCCEEEEECCCEEEEECCCEEEEECCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]