Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226608
Identifier: 21226608
GI number: 21226608
Start: 630204
End: 630569
Strand: Reverse
Name: 21226608
Synonym: MM_0506
Alternate gene names: NA
Gene position: 630569-630204 (Counterclockwise)
Preceding gene: 21226609
Following gene: 21226598
Centisome position: 15.39
GC content: 48.63
Gene sequence:
>366_bases ATGCAGCTAAAAACCGAATATGGAAAGATAGATCCCTATATTACAAAAGACGGTTCAATAATCCGTGAACTCATGCACCC CGCAATCCACGGAAATTCCGGACAGAGCCTTGCCGAAGCTACCGTGCCTGCCGGAGGACAAACAATGCTCCACAAACATG CAGTGGCTGAGGAAATCTATCACATCACGGAAGGCTGCGGGATAATGACCCTCGGCGGGCAGGAGTTTGAAATCCGTAAA GGAGATACCGTCTGTATTCTACCCGGAACTCCGCACAGGATAATGAACACCGGTGAAAAAGAACTGAAAATTCTCTGCTG CTGTGCGCCGGCGTATTCGCATGAGGATACGGAATTGATGAAATGA
Upstream 100 bases:
>100_bases CTCCCTTATTTTTTCCGAATTATGGCAAGAAGAACCCTCGCCTCCCCTTTGAAAAAAATAGTAAAAATAAATATATAGTT GCCAGCCCCAGTAATTTTGA
Downstream 100 bases:
>100_bases TCAGTGGTTTTCTTCTTTTGTCATTTTTACACCTGTCCATCGTAATTTTCAACCTTTCTCCACATACCACTCGTCCCTTG CCTCCACAAGCGCCCTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MQLKTEYGKIDPYITKDGSIIRELMHPAIHGNSGQSLAEATVPAGGQTMLHKHAVAEEIYHITEGCGIMTLGGQEFEIRK GDTVCILPGTPHRIMNTGEKELKILCCCAPAYSHEDTELMK
Sequences:
>Translated_121_residues MQLKTEYGKIDPYITKDGSIIRELMHPAIHGNSGQSLAEATVPAGGQTMLHKHAVAEEIYHITEGCGIMTLGGQEFEIRK GDTVCILPGTPHRIMNTGEKELKILCCCAPAYSHEDTELMK >Mature_121_residues MQLKTEYGKIDPYITKDGSIIRELMHPAIHGNSGQSLAEATVPAGGQTMLHKHAVAEEIYHITEGCGIMTLGGQEFEIRK GDTVCILPGTPHRIMNTGEKELKILCCCAPAYSHEDTELMK
Specific function: Unknown
COG id: COG0662
COG function: function code G; Mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013096 - InterPro: IPR011051 - InterPro: IPR014710 [H]
Pfam domain/function: PF07883 Cupin_2 [H]
EC number: NA
Molecular weight: Translated: 13251; Mature: 13251
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLKTEYGKIDPYITKDGSIIRELMHPAIHGNSGQSLAEATVPAGGQTMLHKHAVAEEIY CCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH HITEGCGIMTLGGQEFEIRKGDTVCILPGTPHRIMNTGEKELKILCCCAPAYSHEDTELM HHHCCCEEEEECCCEEEEECCCEEEEECCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCC K C >Mature Secondary Structure MQLKTEYGKIDPYITKDGSIIRELMHPAIHGNSGQSLAEATVPAGGQTMLHKHAVAEEIY CCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH HITEGCGIMTLGGQEFEIRKGDTVCILPGTPHRIMNTGEKELKILCCCAPAYSHEDTELM HHHCCCEEEEECCCEEEEECCCEEEEECCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]