Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is yfiQ [C]
Identifier: 21226595
GI number: 21226595
Start: 615024
End: 615776
Strand: Reverse
Name: yfiQ [C]
Synonym: MM_0493
Alternate gene names: 21226595
Gene position: 615776-615024 (Counterclockwise)
Preceding gene: 21226596
Following gene: 21226594
Centisome position: 15.03
GC content: 47.54
Gene sequence:
>753_bases ATGAGTATGAAGCAGGTAGATCCAGCCTTTACGGTATCCGGTTCAGATAAAGCTCTGGCGGATGAAATTTTCAAAGCTGC ACTGGATGTTCAGCGGCGAACACCGGGCCTTGAGTCTTTAGGCATTCTGGAAGCGTATGGTATTCCAGTGGTGAAAACTG TGTTTGCAAAAACTGAAGAGGAAGCCGTGAAAGCTGCTGAGGAGATGGGTTATCCTCTGGTGATGAAGGTTGTTTCTCCG CAGATATCACATAAATCGGATGTTGGAGGGATCAGGCTTTCTCTGCAAAGTGGAGATGAGGTGAGGGCAGCTTATCTGGG GATGATGGAAAAGATTCCTGAAAAAAGGCCGGATGCGGTTCTTGAAGGAGTACAGATACAGAAAATGCTCTCAGGGGGAA ACGAAGTAATTATAGGGATGATCCGCGACCCGACATTCGGGCCTATGTTGATGTTCGGGCTTGGCGGGGTTTATGTGGAA ATCCTGAAGGATGTGAGGTTTGCCATTGCCCCTGTGAATGAAAAGGAAGCCAGGGAGATGATTAAAGGGATCAAAGCCTA TCCTCTTCTTGCCGGAGCGCGGGGTGCAAAGCCTTCGGATATTGACGCTCTGGTGGATGCCATCTTAAGAATCTCAAGGC TTGTCTGCGATTTTCCGGAAATTGAGGAGTTTGAGATTAACCCCATGATGGTTTTGGAAGAAGGGAAGGGAGCTTTTGCA GTGGACATGAGGCTTACATTGAAGAAAAATTAA
Upstream 100 bases:
>100_bases ATTAAAGTAAACTTTTTTCAATTTGAAGTTAAGACCTCACAATTTTTAACTTATTAATGAAATTAATTATCTTAAAGAAT AACTGTTCTGAGGGCGTCAT
Downstream 100 bases:
>100_bases TTTTTTATATAAATTGGTAATCTGAAGAACAAGTGAGATTCTGGATTACTTTTATCGTGAACAGGCTTTTTTCTCCCTCT TTATTTCTTAACCTGTCCAT
Product: Acetyl-CoA synthetase subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSMKQVDPAFTVSGSDKALADEIFKAALDVQRRTPGLESLGILEAYGIPVVKTVFAKTEEEAVKAAEEMGYPLVMKVVSP QISHKSDVGGIRLSLQSGDEVRAAYLGMMEKIPEKRPDAVLEGVQIQKMLSGGNEVIIGMIRDPTFGPMLMFGLGGVYVE ILKDVRFAIAPVNEKEAREMIKGIKAYPLLAGARGAKPSDIDALVDAILRISRLVCDFPEIEEFEINPMMVLEEGKGAFA VDMRLTLKKN
Sequences:
>Translated_250_residues MSMKQVDPAFTVSGSDKALADEIFKAALDVQRRTPGLESLGILEAYGIPVVKTVFAKTEEEAVKAAEEMGYPLVMKVVSP QISHKSDVGGIRLSLQSGDEVRAAYLGMMEKIPEKRPDAVLEGVQIQKMLSGGNEVIIGMIRDPTFGPMLMFGLGGVYVE ILKDVRFAIAPVNEKEAREMIKGIKAYPLLAGARGAKPSDIDALVDAILRISRLVCDFPEIEEFEINPMMVLEEGKGAFA VDMRLTLKKN >Mature_249_residues SMKQVDPAFTVSGSDKALADEIFKAALDVQRRTPGLESLGILEAYGIPVVKTVFAKTEEEAVKAAEEMGYPLVMKVVSPQ ISHKSDVGGIRLSLQSGDEVRAAYLGMMEKIPEKRPDAVLEGVQIQKMLSGGNEVIIGMIRDPTFGPMLMFGLGGVYVEI LKDVRFAIAPVNEKEAREMIKGIKAYPLLAGARGAKPSDIDALVDAILRISRLVCDFPEIEEFEINPMMVLEEGKGAFAV DMRLTLKKN
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=209, Percent_Identity=34.4497607655502, Blast_Score=120, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 27243; Mature: 27112
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKQVDPAFTVSGSDKALADEIFKAALDVQRRTPGLESLGILEAYGIPVVKTVFAKTEE CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCHHCCHHHHCCCHHHHHHHHCCHH EAVKAAEEMGYPLVMKVVSPQISHKSDVGGIRLSLQSGDEVRAAYLGMMEKIPEKRPDAV HHHHHHHHCCCCEEEHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHH LEGVQIQKMLSGGNEVIIGMIRDPTFGPMLMFGLGGVYVEILKDVRFAIAPVNEKEAREM HHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH IKGIKAYPLLAGARGAKPSDIDALVDAILRISRLVCDFPEIEEFEINPMMVLEEGKGAFA HHHHHHCHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEE VDMRLTLKKN EEEEEEEECC >Mature Secondary Structure SMKQVDPAFTVSGSDKALADEIFKAALDVQRRTPGLESLGILEAYGIPVVKTVFAKTEE CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCHHCCHHHHCCCHHHHHHHHCCHH EAVKAAEEMGYPLVMKVVSPQISHKSDVGGIRLSLQSGDEVRAAYLGMMEKIPEKRPDAV HHHHHHHHCCCCEEEHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHH LEGVQIQKMLSGGNEVIIGMIRDPTFGPMLMFGLGGVYVEILKDVRFAIAPVNEKEAREM HHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH IKGIKAYPLLAGARGAKPSDIDALVDAILRISRLVCDFPEIEEFEINPMMVLEEGKGAFA HHHHHHCHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEE VDMRLTLKKN EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]