The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is hspA [H]

Identifier: 21226585

GI number: 21226585

Start: 606785

End: 607243

Strand: Direct

Name: hspA [H]

Synonym: MM_0483

Alternate gene names: 21226585

Gene position: 606785-607243 (Clockwise)

Preceding gene: 21226584

Following gene: 21226588

Centisome position: 14.81

GC content: 44.01

Gene sequence:

>459_bases
ATGAAACTGCCAATTAAGAGACCATCACGTGACGTGTACAGCTGGGACCCGTTTGATGAGATCAAAAGGATGCAGGAATA
TATGGAACAGATGATGAGAGCATTTCCTGCACTTGAAAACAGATACGTAAGCGATACCTTATCCCCTCTGACCGATGTTG
CGGAAGAAGACAATAAAGTAATTGTTACAACAGACCTGCCAGGCATTGACAAAGAAAATGTCGAGCTGAACCTCAGGGAG
AATTTACTTGTAATCAGCGCACAGAAAGGAAAAGAGGAGGAGACGGAAAAAGAAGGCTATCTCAGAAAAGAGAGGTCTTT
CATGCGCTACTACCGTGAGATACCTCTTCCTGATAACGTAACCGAAGACGGGGCAACTGCCCAGCTCAAAAATGGCGTCT
TAACAGTCACGCTTCCAAAGACGAAAGACGTAACTGAGAAAAGAATTCAGATTGAATGA

Upstream 100 bases:

>100_bases
ACACCTCCAGAAAACCTACAGATAAGATCAAAAATTACTAACCAACCTCAATAAACCACCAGAAGTAAACTGAGTAATTT
GAGCAAGGAGGAATTTGTAC

Downstream 100 bases:

>100_bases
TTCAAAATTAACGATTCAAAATGAACGATTCAAAATGAATGATGAGAGTCTGGTAAATTATTCAAACAGACAAACAAACC
ACCAATAAAACGGATTAAAT

Product: small heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKLPIKRPSRDVYSWDPFDEIKRMQEYMEQMMRAFPALENRYVSDTLSPLTDVAEEDNKVIVTTDLPGIDKENVELNLRE
NLLVISAQKGKEEETEKEGYLRKERSFMRYYREIPLPDNVTEDGATAQLKNGVLTVTLPKTKDVTEKRIQIE

Sequences:

>Translated_152_residues
MKLPIKRPSRDVYSWDPFDEIKRMQEYMEQMMRAFPALENRYVSDTLSPLTDVAEEDNKVIVTTDLPGIDKENVELNLRE
NLLVISAQKGKEEETEKEGYLRKERSFMRYYREIPLPDNVTEDGATAQLKNGVLTVTLPKTKDVTEKRIQIE
>Mature_152_residues
MKLPIKRPSRDVYSWDPFDEIKRMQEYMEQMMRAFPALENRYVSDTLSPLTDVAEEDNKVIVTTDLPGIDKENVELNLRE
NLLVISAQKGKEEETEKEGYLRKERSFMRYYREIPLPDNVTEDGATAQLKNGVLTVTLPKTKDVTEKRIQIE

Specific function: May stabilize cellular components during stress and spore formation [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17755; Mature: 17755

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPIKRPSRDVYSWDPFDEIKRMQEYMEQMMRAFPALENRYVSDTLSPLTDVAEEDNKV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IVTTDLPGIDKENVELNLRENLLVISAQKGKEEETEKEGYLRKERSFMRYYREIPLPDNV
EEEECCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
TEDGATAQLKNGVLTVTLPKTKDVTEKRIQIE
CCCCCCEEECCCEEEEEECCCCCCCCCCEECC
>Mature Secondary Structure
MKLPIKRPSRDVYSWDPFDEIKRMQEYMEQMMRAFPALENRYVSDTLSPLTDVAEEDNKV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IVTTDLPGIDKENVELNLRENLLVISAQKGKEEETEKEGYLRKERSFMRYYREIPLPDNV
EEEECCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
TEDGATAQLKNGVLTVTLPKTKDVTEKRIQIE
CCCCCCEEECCCEEEEEECCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226695; 8423161 [H]