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The map label for this gene is 21226588

Identifier: 21226588

GI number: 21226588

Start: 609943

End: 610536

Strand: Direct

Name: 21226588

Synonym: MM_0486

Alternate gene names: NA

Gene position: 609943-610536 (Clockwise)

Preceding gene: 21226585

Following gene: 21226589

Centisome position: 14.89

GC content: 46.3

Gene sequence:

>594_bases
ATGGTAGCAGAGGAAGAGAATTGCGGAAACCGTGAAGAAAGGGTTAGAAAACTGGTTGAAGCAGGGTATGAGACTGTAGC
ACGGGAGATAATAGCCTGTATAAGGTGCCCTCTCCATGAAAGTGCAATTAAAAGAGTGATAGGAAAAGGATCCTGCAATC
CGAAAGTTTTCTTTATAGGAGAAGCCCCCGGAGAAAGTGAGAACAAATCAGGAATTCCCTTTTACGGCAGGGCGGGAAAA
AAGCTGGACCAGATGGTTGAGTATATGGGGCTTTCGGAAGAAGACTGGTTCGTAACAAACACAGTTAAATGCCGTCCCCC
GGGAAACCGAAAGCCAAGGGTACAGGAAATAGAATGCTGCAAACCCTTCCTTATTGCCCAGATAACCCTTCTTAACCCCA
AACTCATAATTCTCCTGGGCAACACAGCTGAAAAGTCATTTTGCCCGGAAAGAAAACTGGAGTGGGGAGTCCCGGTAGAA
CATGAGGGAAGGACAATCCTTAAACTTTACCATCCTGCAGCCCTGATTTACACAGCTTCGAAGATAGAAGTCCAGCGCGG
TTTCATTGATAAAAACAGGGAGCTCTGGCAGTAA

Upstream 100 bases:

>100_bases
TTTTTTCCATAAATAAGTTTGTCCTCGTATACATCTCAAGAGATAGATTACTATTTTTATATGAAAAATAAGAAAAGAAT
AAGCCAGAGAGGCAATCGAT

Downstream 100 bases:

>100_bases
AGAAAAATAATAGAAGGGAAGGAAAATAATAGTAAAGAAGAAAAATAATAGTAAAGAAGAAAAATAATAGTAAAGAAGAA
AAATAATAGTAAAGAAGAAA

Product: DNA polymerase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase; Phage SPO1 DNA Polymerase-Like Protein; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase-Related Protein; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Phage DNA Polymerase; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Arginine Biosynthesis Bifunctional Protein ArgJ; DNA Polymerase-Related Protein; Phage Related DNA Polymerase; Bacteriophage-Type DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; DNA Polymerase Related Protein; Uracil DNA Glycosylase; DNA Glycosylase; DNA-Directed DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase-Related Protein

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MVAEEENCGNREERVRKLVEAGYETVAREIIACIRCPLHESAIKRVIGKGSCNPKVFFIGEAPGESENKSGIPFYGRAGK
KLDQMVEYMGLSEEDWFVTNTVKCRPPGNRKPRVQEIECCKPFLIAQITLLNPKLIILLGNTAEKSFCPERKLEWGVPVE
HEGRTILKLYHPAALIYTASKIEVQRGFIDKNRELWQ

Sequences:

>Translated_197_residues
MVAEEENCGNREERVRKLVEAGYETVAREIIACIRCPLHESAIKRVIGKGSCNPKVFFIGEAPGESENKSGIPFYGRAGK
KLDQMVEYMGLSEEDWFVTNTVKCRPPGNRKPRVQEIECCKPFLIAQITLLNPKLIILLGNTAEKSFCPERKLEWGVPVE
HEGRTILKLYHPAALIYTASKIEVQRGFIDKNRELWQ
>Mature_197_residues
MVAEEENCGNREERVRKLVEAGYETVAREIIACIRCPLHESAIKRVIGKGSCNPKVFFIGEAPGESENKSGIPFYGRAGK
KLDQMVEYMGLSEEDWFVTNTVKCRPPGNRKPRVQEIECCKPFLIAQITLLNPKLIILLGNTAEKSFCPERKLEWGVPVE
HEGRTILKLYHPAALIYTASKIEVQRGFIDKNRELWQ

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 22390; Mature: 22390

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAEEENCGNREERVRKLVEAGYETVAREIIACIRCPLHESAIKRVIGKGSCNPKVFFIG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEE
EAPGESENKSGIPFYGRAGKKLDQMVEYMGLSEEDWFVTNTVKCRPPGNRKPRVQEIECC
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECEEEECCCCCCCCCCCHHHHC
KPFLIAQITLLNPKLIILLGNTAEKSFCPERKLEWGVPVEHEGRTILKLYHPAALIYTAS
CHHHHEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEHH
KIEVQRGFIDKNRELWQ
HHEEECCCCCCCCCCCC
>Mature Secondary Structure
MVAEEENCGNREERVRKLVEAGYETVAREIIACIRCPLHESAIKRVIGKGSCNPKVFFIG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEE
EAPGESENKSGIPFYGRAGKKLDQMVEYMGLSEEDWFVTNTVKCRPPGNRKPRVQEIECC
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECEEEECCCCCCCCCCCHHHHC
KPFLIAQITLLNPKLIILLGNTAEKSFCPERKLEWGVPVEHEGRTILKLYHPAALIYTAS
CHHHHEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEHH
KIEVQRGFIDKNRELWQ
HHEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA