| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226557
Identifier: 21226557
GI number: 21226557
Start: 576755
End: 577423
Strand: Direct
Name: 21226557
Synonym: MM_0455
Alternate gene names: NA
Gene position: 576755-577423 (Clockwise)
Preceding gene: 21226555
Following gene: 21226560
Centisome position: 14.08
GC content: 44.39
Gene sequence:
>669_bases GTGACTAAAATGCACGCTGAAAGCAACAATATTCAGGACTACCTCAAAAAGAGTGAAGTCATAAACTACGATCATAAGCT GATCGTTAATAAGTGCCTTGAATTAGAGAAAGATATGGAAAACATAGAAAACATGGAAAATATAGAAGGCATGGAAGAAA AAAAAGAAATCAGCCTGATCAGGAAGATTTACGAATTTGTCCGGGACGATATCCATCATTCAGGAGATATTGGAGCACAG GAGGTCACCTGTACGGCATCCGAAGTTCTTGAGTTCGGGCATGGGATCTGCTGTGCCAAATCCCACCTGCTTGCAGCCAT GCTGAGGTATTTCGGGATACCAGCCGGGTTCTGTTACCAGAAACTCTGTTCAGGTCAGGAAGGAATTGACAGGAAAGTCC TGCATGGACTGAACGCTGTATACTTGAAAGACCTGGACAGATGGATAAGGCTGGACGCAAGAGGCAATAAGCCGGGTGTA GACGCTCAGTTCTCCTTATATGAAGAAAAAATTGCCTGGCCGGTTAAGAAAGAGCGTGGGGAAGAGGATCACCCAATAAT ATTCAAAGAGCCGAGTCCGACTGTTATTGAGATCTTAAAGAAAAGCAACAGCAGGAAAGAAATGTGGGAACAGTGGGATC TTGGGCTGAGGGACCTGTTCCATGATTAA
Upstream 100 bases:
>100_bases TTTTATGTTTATCATGTATCTTAATCAATAAAAAGCAGTTTCCTATCAAATTTAAATTTCATATAGAATTTGTAGTATAT TTGACAGGTTAGATTAATAG
Downstream 100 bases:
>100_bases GAATTAATCCTGAATTAAAAAATTAATCAGGAGCTTCTCAGGGAAAGCCTGTCCGTTGTGGTTATCATATCCAGCCATCG TATCCAGCCATTGTATCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Lipoprotein; Cro-Like Protein; Cysteine Protease; GCN5-Related N-Acetyltransferase; Transglutaminase-Like; Transglutaminase/Protease
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTKMHAESNNIQDYLKKSEVINYDHKLIVNKCLELEKDMENIENMENIEGMEEKKEISLIRKIYEFVRDDIHHSGDIGAQ EVTCTASEVLEFGHGICCAKSHLLAAMLRYFGIPAGFCYQKLCSGQEGIDRKVLHGLNAVYLKDLDRWIRLDARGNKPGV DAQFSLYEEKIAWPVKKERGEEDHPIIFKEPSPTVIEILKKSNSRKEMWEQWDLGLRDLFHD
Sequences:
>Translated_222_residues MTKMHAESNNIQDYLKKSEVINYDHKLIVNKCLELEKDMENIENMENIEGMEEKKEISLIRKIYEFVRDDIHHSGDIGAQ EVTCTASEVLEFGHGICCAKSHLLAAMLRYFGIPAGFCYQKLCSGQEGIDRKVLHGLNAVYLKDLDRWIRLDARGNKPGV DAQFSLYEEKIAWPVKKERGEEDHPIIFKEPSPTVIEILKKSNSRKEMWEQWDLGLRDLFHD >Mature_221_residues TKMHAESNNIQDYLKKSEVINYDHKLIVNKCLELEKDMENIENMENIEGMEEKKEISLIRKIYEFVRDDIHHSGDIGAQE VTCTASEVLEFGHGICCAKSHLLAAMLRYFGIPAGFCYQKLCSGQEGIDRKVLHGLNAVYLKDLDRWIRLDARGNKPGVD AQFSLYEEKIAWPVKKERGEEDHPIIFKEPSPTVIEILKKSNSRKEMWEQWDLGLRDLFHD
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25755; Mature: 25624
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKMHAESNNIQDYLKKSEVINYDHKLIVNKCLELEKDMENIENMENIEGMEEKKEISLI CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RKIYEFVRDDIHHSGDIGAQEVTCTASEVLEFGHGICCAKSHLLAAMLRYFGIPAGFCYQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH KLCSGQEGIDRKVLHGLNAVYLKDLDRWIRLDARGNKPGVDAQFSLYEEKIAWPVKKERG HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCC EEDHPIIFKEPSPTVIEILKKSNSRKEMWEQWDLGLRDLFHD CCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHCCCHHHHCCC >Mature Secondary Structure TKMHAESNNIQDYLKKSEVINYDHKLIVNKCLELEKDMENIENMENIEGMEEKKEISLI CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RKIYEFVRDDIHHSGDIGAQEVTCTASEVLEFGHGICCAKSHLLAAMLRYFGIPAGFCYQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH KLCSGQEGIDRKVLHGLNAVYLKDLDRWIRLDARGNKPGVDAQFSLYEEKIAWPVKKERG HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCC EEDHPIIFKEPSPTVIEILKKSNSRKEMWEQWDLGLRDLFHD CCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA