| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226555
Identifier: 21226555
GI number: 21226555
Start: 575694
End: 575927
Strand: Direct
Name: 21226555
Synonym: MM_0453
Alternate gene names: NA
Gene position: 575694-575927 (Clockwise)
Preceding gene: 21226553
Following gene: 21226557
Centisome position: 14.05
GC content: 42.31
Gene sequence:
>234_bases ATGGAAACCGAGAGCAAAGATTTATTTATTACAGAGCTTCCTGTAAAAACTCAGGAAATATTGAAAAATATGGATTATCC TGTAAAAAGAAATGAAATTATTGGACGAGCGAGTAGGAGTGGGGCGATCCCTGACGTAATGCGGGAACTTGGCATGCTTC CGGACAGGAAATACTACAGCGATGAGGATGTCGCCGAGGAGCTTCATAAAATTTACATGGGAATTCCGGCCTGA
Upstream 100 bases:
>100_bases CATACGGGATAGGAATTGTCTCCTGAAAAGGAGCAGGCAAATTATGTGGACGTCTCAGGGGATTTAGAAGAAAATTAAAC AAAAATAAAGGAGGAATAGT
Downstream 100 bases:
>100_bases AAATCTTAATTTGTTTTTTTCGTTTATTTTGAAACAGTGGGAAAAGAATAATTCTTACCCACATTGCAGTTTTAGATTCT CCTCTTTTTCTTTTTTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues METESKDLFITELPVKTQEILKNMDYPVKRNEIIGRASRSGAIPDVMRELGMLPDRKYYSDEDVAEELHKIYMGIPA
Sequences:
>Translated_77_residues METESKDLFITELPVKTQEILKNMDYPVKRNEIIGRASRSGAIPDVMRELGMLPDRKYYSDEDVAEELHKIYMGIPA >Mature_77_residues METESKDLFITELPVKTQEILKNMDYPVKRNEIIGRASRSGAIPDVMRELGMLPDRKYYSDEDVAEELHKIYMGIPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8887; Mature: 8887
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METESKDLFITELPVKTQEILKNMDYPVKRNEIIGRASRSGAIPDVMRELGMLPDRKYYS CCCCCCCEEEEECCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC DEDVAEELHKIYMGIPA CHHHHHHHHHHHHCCCC >Mature Secondary Structure METESKDLFITELPVKTQEILKNMDYPVKRNEIIGRASRSGAIPDVMRELGMLPDRKYYS CCCCCCCEEEEECCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC DEDVAEELHKIYMGIPA CHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA