| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226556
Identifier: 21226556
GI number: 21226556
Start: 576082
End: 576606
Strand: Reverse
Name: 21226556
Synonym: MM_0454
Alternate gene names: NA
Gene position: 576606-576082 (Counterclockwise)
Preceding gene: 21226558
Following gene: 21226554
Centisome position: 14.08
GC content: 34.86
Gene sequence:
>525_bases ATGGTAGAGGACGAAATCCAGGCTATACAAAAAAGTGTTGAAAAAGATTTATTCGAGGAACAGAACAAAGTTCTGGATCG GTTTTATTCATTGATAACGTTGACATTTACAGCTTTTGCTTTCTCTATTACAGCCCTTAGTTTTTTTTTCGGGAGAGGAG CCCCTAACATCCAGGAAGCTCTCCGTGCTTATCATATCGGTTTTTCTTTTCTTTGTCTATTTCTGGCTTTTACAATTTCA ATTACTAATGTACTGGCAATATTTCACCACAGAAAGCTGGTAAAAAAGGATTACATGATAGGATATAGAGAGGATAATGA ACTGATAAATAATAATTTGGCATTATATCTCTCTATTGCAAGACATAAGAATTACTATGTAATTGCAATTACTCTTATTG GACTTGGAATTACATCCTTTATTAATCACTTCTCACAGCATCGCATAGTATCCGCTATTCTTGTTGCGGGATTTGTTGTT ATAGTACTGTTGCTAATACGCAATTCTCGCAAGTATCTTTCCTGA
Upstream 100 bases:
>100_bases AATTTGATAGGAAACTGCTTTTTATTGATTAAGATACATGATAAACATAAAATACTGAAAATACTGCTATTTCTCTTGAA TTGAAAATGGGGGCAACGGT
Downstream 100 bases:
>100_bases TAATGCAACAAAGATAATCAATATCATAATCCATGATCGGAAAAATGACAGGAACATGAAAAAAGAAAAAGAGGAGAATC TAAAACTGCAATGTGGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MVEDEIQAIQKSVEKDLFEEQNKVLDRFYSLITLTFTAFAFSITALSFFFGRGAPNIQEALRAYHIGFSFLCLFLAFTIS ITNVLAIFHHRKLVKKDYMIGYREDNELINNNLALYLSIARHKNYYVIAITLIGLGITSFINHFSQHRIVSAILVAGFVV IVLLLIRNSRKYLS
Sequences:
>Translated_174_residues MVEDEIQAIQKSVEKDLFEEQNKVLDRFYSLITLTFTAFAFSITALSFFFGRGAPNIQEALRAYHIGFSFLCLFLAFTIS ITNVLAIFHHRKLVKKDYMIGYREDNELINNNLALYLSIARHKNYYVIAITLIGLGITSFINHFSQHRIVSAILVAGFVV IVLLLIRNSRKYLS >Mature_174_residues MVEDEIQAIQKSVEKDLFEEQNKVLDRFYSLITLTFTAFAFSITALSFFFGRGAPNIQEALRAYHIGFSFLCLFLAFTIS ITNVLAIFHHRKLVKKDYMIGYREDNELINNNLALYLSIARHKNYYVIAITLIGLGITSFINHFSQHRIVSAILVAGFVV IVLLLIRNSRKYLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19990; Mature: 19990
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEDEIQAIQKSVEKDLFEEQNKVLDRFYSLITLTFTAFAFSITALSFFFGRGAPNIQEA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LRAYHIGFSFLCLFLAFTISITNVLAIFHHRKLVKKDYMIGYREDNELINNNLALYLSIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHEEEEHH RHKNYYVIAITLIGLGITSFINHFSQHRIVSAILVAGFVVIVLLLIRNSRKYLS HCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MVEDEIQAIQKSVEKDLFEEQNKVLDRFYSLITLTFTAFAFSITALSFFFGRGAPNIQEA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LRAYHIGFSFLCLFLAFTISITNVLAIFHHRKLVKKDYMIGYREDNELINNNLALYLSIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHEEEEHH RHKNYYVIAITLIGLGITSFINHFSQHRIVSAILVAGFVVIVLLLIRNSRKYLS HCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA