| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226554
Identifier: 21226554
GI number: 21226554
Start: 574548
End: 574937
Strand: Reverse
Name: 21226554
Synonym: MM_0452
Alternate gene names: NA
Gene position: 574937-574548 (Counterclockwise)
Preceding gene: 21226556
Following gene: 21226548
Centisome position: 14.04
GC content: 27.18
Gene sequence:
>390_bases TTGTCTACAAATAGAAAAGATATAAAAAAAGAAGATATATTTCAAGCAGAAAGGTTATTAAAAAAAATTGAAAACATATA TTTGACTGCTGCATGTAAAGATAAATTATGCGGATTAGTTGAAAAATATTTTTATGATAGTTATGAGAATTGCTCCCCTA AGTATGCAAAACTCATAATTAATCATTTTGAATCTGACTTGTTGTTGGCCACTTGTTTTTGTACCAAATCTGACAATCTA GAATTGCCTGAATTAAAACACGATATTTCTTCAACTTTTTCTATGATAATTTATAAGGCATGTGATTCTAGGGTTTCTTG GTGGGACAAAATTTTTAAAGAAATCGAACTGAAAATCAACCCGATTGCGAAAATAAAAATTAAAAAATAA
Upstream 100 bases:
>100_bases AGCGGTATTTCGATCTCTCTATCTAATTTTGCATTATGTTGAAGAACTTTACTTGATAAAATTTAATATGTAGTAAGATC TATTTCAATAGGGTCATATG
Downstream 100 bases:
>100_bases AATTATCTATCTCATGCACTCTCAAAAATACATTTGATTCCATAGTTTGGATGAAATATTCTACTTCAAGATAGATATAT CTTTAATTTCAGAATAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSTNRKDIKKEDIFQAERLLKKIENIYLTAACKDKLCGLVEKYFYDSYENCSPKYAKLIINHFESDLLLATCFCTKSDNL ELPELKHDISSTFSMIIYKACDSRVSWWDKIFKEIELKINPIAKIKIKK
Sequences:
>Translated_129_residues MSTNRKDIKKEDIFQAERLLKKIENIYLTAACKDKLCGLVEKYFYDSYENCSPKYAKLIINHFESDLLLATCFCTKSDNL ELPELKHDISSTFSMIIYKACDSRVSWWDKIFKEIELKINPIAKIKIKK >Mature_128_residues STNRKDIKKEDIFQAERLLKKIENIYLTAACKDKLCGLVEKYFYDSYENCSPKYAKLIINHFESDLLLATCFCTKSDNLE LPELKHDISSTFSMIIYKACDSRVSWWDKIFKEIELKINPIAKIKIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15169; Mature: 15038
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNRKDIKKEDIFQAERLLKKIENIYLTAACKDKLCGLVEKYFYDSYENCSPKYAKLII CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH NHFESDLLLATCFCTKSDNLELPELKHDISSTFSMIIYKACDSRVSWWDKIFKEIELKIN HHHCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC PIAKIKIKK CEEEEEECC >Mature Secondary Structure STNRKDIKKEDIFQAERLLKKIENIYLTAACKDKLCGLVEKYFYDSYENCSPKYAKLII CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH NHFESDLLLATCFCTKSDNLELPELKHDISSTFSMIIYKACDSRVSWWDKIFKEIELKIN HHHCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC PIAKIKIKK CEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA