The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226553

Identifier: 21226553

GI number: 21226553

Start: 574006

End: 574356

Strand: Direct

Name: 21226553

Synonym: MM_0451

Alternate gene names: NA

Gene position: 574006-574356 (Clockwise)

Preceding gene: 21226552

Following gene: 21226555

Centisome position: 14.01

GC content: 43.02

Gene sequence:

>351_bases
ATGAAAGATTTTCCGGAGTTCATGAAAAGTAAAAGCAATCATATCAGCAGCAAAGAACAAAACACAGAAGATATTGACGG
CTATTTTTACGAAGGCGCAGACGGCAGCCAGATGGCTTTCTGGACCTGTTATTCTGACAGGGTTTCCAAAAAACACACTC
ATGAGTTTGACGAGTGGATGGTTTGCGTTAGCGGACAATATACAGCGTATTTAAATGATGAGGAATTTGTCCTCAATCCG
GGGTGTGAATTATTCATTCCCAAGGGGGCAGAACAGTGGGAAAAGTGTATCGCCGGAACGAGAACGATTCATGCGTTTGG
GGGAAAGAGGATTCGTAGGAATGAAAAATGA

Upstream 100 bases:

>100_bases
GGAATACAGGTTCTCTATGAGTTATTTTTTGATTTGAAGTTATGATTTATACATTGATTTGATATTATATAAATTAGTTA
AATGCTGGGAGATTTCGAAC

Downstream 100 bases:

>100_bases
GGAATTTATGAACTCTGTACAACACATTGTCTCAAAGCTGGATTCATTCTACAATTGAATAACGATCGTTGTTGACTTTA
TATTAGATAGGAAATTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKDFPEFMKSKSNHISSKEQNTEDIDGYFYEGADGSQMAFWTCYSDRVSKKHTHEFDEWMVCVSGQYTAYLNDEEFVLNP
GCELFIPKGAEQWEKCIAGTRTIHAFGGKRIRRNEK

Sequences:

>Translated_116_residues
MKDFPEFMKSKSNHISSKEQNTEDIDGYFYEGADGSQMAFWTCYSDRVSKKHTHEFDEWMVCVSGQYTAYLNDEEFVLNP
GCELFIPKGAEQWEKCIAGTRTIHAFGGKRIRRNEK
>Mature_116_residues
MKDFPEFMKSKSNHISSKEQNTEDIDGYFYEGADGSQMAFWTCYSDRVSKKHTHEFDEWMVCVSGQYTAYLNDEEFVLNP
GCELFIPKGAEQWEKCIAGTRTIHAFGGKRIRRNEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13506; Mature: 13506

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDFPEFMKSKSNHISSKEQNTEDIDGYFYEGADGSQMAFWTCYSDRVSKKHTHEFDEWM
CCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHCCCCCCCEE
VCVSGQYTAYLNDEEFVLNPGCELFIPKGAEQWEKCIAGTRTIHAFGGKRIRRNEK
EEECCCEEEEECCCCEEECCCCEEEECCCHHHHHHHHHCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MKDFPEFMKSKSNHISSKEQNTEDIDGYFYEGADGSQMAFWTCYSDRVSKKHTHEFDEWM
CCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHCCCCCCCEE
VCVSGQYTAYLNDEEFVLNPGCELFIPKGAEQWEKCIAGTRTIHAFGGKRIRRNEK
EEECCCEEEEECCCCEEECCCCEEEECCCHHHHHHHHHCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA