| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226553
Identifier: 21226553
GI number: 21226553
Start: 574006
End: 574356
Strand: Direct
Name: 21226553
Synonym: MM_0451
Alternate gene names: NA
Gene position: 574006-574356 (Clockwise)
Preceding gene: 21226552
Following gene: 21226555
Centisome position: 14.01
GC content: 43.02
Gene sequence:
>351_bases ATGAAAGATTTTCCGGAGTTCATGAAAAGTAAAAGCAATCATATCAGCAGCAAAGAACAAAACACAGAAGATATTGACGG CTATTTTTACGAAGGCGCAGACGGCAGCCAGATGGCTTTCTGGACCTGTTATTCTGACAGGGTTTCCAAAAAACACACTC ATGAGTTTGACGAGTGGATGGTTTGCGTTAGCGGACAATATACAGCGTATTTAAATGATGAGGAATTTGTCCTCAATCCG GGGTGTGAATTATTCATTCCCAAGGGGGCAGAACAGTGGGAAAAGTGTATCGCCGGAACGAGAACGATTCATGCGTTTGG GGGAAAGAGGATTCGTAGGAATGAAAAATGA
Upstream 100 bases:
>100_bases GGAATACAGGTTCTCTATGAGTTATTTTTTGATTTGAAGTTATGATTTATACATTGATTTGATATTATATAAATTAGTTA AATGCTGGGAGATTTCGAAC
Downstream 100 bases:
>100_bases GGAATTTATGAACTCTGTACAACACATTGTCTCAAAGCTGGATTCATTCTACAATTGAATAACGATCGTTGTTGACTTTA TATTAGATAGGAAATTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MKDFPEFMKSKSNHISSKEQNTEDIDGYFYEGADGSQMAFWTCYSDRVSKKHTHEFDEWMVCVSGQYTAYLNDEEFVLNP GCELFIPKGAEQWEKCIAGTRTIHAFGGKRIRRNEK
Sequences:
>Translated_116_residues MKDFPEFMKSKSNHISSKEQNTEDIDGYFYEGADGSQMAFWTCYSDRVSKKHTHEFDEWMVCVSGQYTAYLNDEEFVLNP GCELFIPKGAEQWEKCIAGTRTIHAFGGKRIRRNEK >Mature_116_residues MKDFPEFMKSKSNHISSKEQNTEDIDGYFYEGADGSQMAFWTCYSDRVSKKHTHEFDEWMVCVSGQYTAYLNDEEFVLNP GCELFIPKGAEQWEKCIAGTRTIHAFGGKRIRRNEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13506; Mature: 13506
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDFPEFMKSKSNHISSKEQNTEDIDGYFYEGADGSQMAFWTCYSDRVSKKHTHEFDEWM CCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHCCCCCCCEE VCVSGQYTAYLNDEEFVLNPGCELFIPKGAEQWEKCIAGTRTIHAFGGKRIRRNEK EEECCCEEEEECCCCEEECCCCEEEECCCHHHHHHHHHCCCEEEECCCCCCCCCCC >Mature Secondary Structure MKDFPEFMKSKSNHISSKEQNTEDIDGYFYEGADGSQMAFWTCYSDRVSKKHTHEFDEWM CCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHCCCCCCCEE VCVSGQYTAYLNDEEFVLNPGCELFIPKGAEQWEKCIAGTRTIHAFGGKRIRRNEK EEECCCEEEEECCCCEEECCCCEEEECCCHHHHHHHHHCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA