The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226508

Identifier: 21226508

GI number: 21226508

Start: 517884

End: 519059

Strand: Reverse

Name: 21226508

Synonym: MM_0406

Alternate gene names: NA

Gene position: 519059-517884 (Counterclockwise)

Preceding gene: 21226510

Following gene: 21226507

Centisome position: 12.67

GC content: 37.5

Gene sequence:

>1176_bases
TTGATACCAGCCGTAAGTGCACAGGAAGAAAAAGATTATTCTGTAACCACTGAGAATGCTTTTAAGCATGCTAATGCAAA
CATGATAAGTTTTATAGCAGCCGGCACACCAGGCTTTGAGAACTGGACAGGGGCATCTGTTGATCCCAATCCACTAGAGC
TTTATGACATAAATGGTAAAAAATTATTTTTTCGATTCTCAGTATATAAAGAAAATAAATTAATAGATACAATCGACGTT
TGTGCCGATAAAACGTTGGGACCTTCAATCTATGACATTGTATTTGATCCTGAACCTTATAAAGCGACTGAAGCCATGAA
AAAATCAATAGAAATAGCCAAAAGTGAATATTCAGATGGGAAAATCAAATCAACCAATTTGGTTGTATACAGCTATCCAA
GGATAGGGGCGATGACTGTGGTGAAAGACAAGACCACTGGAATTGAACACCGGATATTTGTAGATGCTTACTCCCTTAAT
GAGGTTGAAGATAAACCCGCAACTGAAACAGAACCTGGAATATGGTCAATGTATGACAAGATTTTGACAAATGGAAAGGA
AAACAATTTAAAGGAATGGCAAAAAAGTGATGAACTTGCCAAATCTATAGAACAAGCAGCAGCTAATAAAGGAGTTAATA
TTAATGCTGCAGTTACTGAAGAAAATATTAAAAAACTCAGTGACGAGGGAGTAGTGAAAAGTTCATTTACAGGTAAAATA
CTTGATATTAACGGTATTGGACAAGAACGAGATGTCTTTTGTGGCCCAGCATGTATCCGAATGGTTTGTAAATATTATAA
TCAACCGACTCCCATCCCTACGCAGGATACAATCTATAGGGGTGATGGACTATGGAATTGGAACCCTGCTTCCATATACA
CATCTGGGCTCTCAGCTAATGATGTTGTAGTGTGGGCTACATATAGATGGGGAAAAACGGGAACTATAGCTAGTAGTTTT
TCTGATAGTGTCGCTATATCAGAAATTGAAAACAATAGACCATTCTTCAGTATGATTCCAGGTCATTTTCGACTTTGTAA
AGGATACATAGTTCAAGATGGGTATACATATTTGCGCATTAATGACCCACTGCCTGTTGGTTCGACATATGGTAATCCAG
GATTACTTGAACGCACATACGGCAGTTCAGAATCTACACGTATATATGTAAGGTAA

Upstream 100 bases:

>100_bases
CTGCCTCCTAGGGAAAAAATAACTAGGAGTTAGACGAATGATTAAGAACAAAATTGGAATCGGAACGCTAATTTTATTAA
TTCTGCTGGTTGTTATGGCA

Downstream 100 bases:

>100_bases
AAATTCCTCAGAGGAGGTTGATAAACTTCTGGTTTCAACGGTTTCTATGAACCTATATAATAACCAGCCAAAGATTGGGG
TTTATCGAAACCTCCTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MIPAVSAQEEKDYSVTTENAFKHANANMISFIAAGTPGFENWTGASVDPNPLELYDINGKKLFFRFSVYKENKLIDTIDV
CADKTLGPSIYDIVFDPEPYKATEAMKKSIEIAKSEYSDGKIKSTNLVVYSYPRIGAMTVVKDKTTGIEHRIFVDAYSLN
EVEDKPATETEPGIWSMYDKILTNGKENNLKEWQKSDELAKSIEQAAANKGVNINAAVTEENIKKLSDEGVVKSSFTGKI
LDINGIGQERDVFCGPACIRMVCKYYNQPTPIPTQDTIYRGDGLWNWNPASIYTSGLSANDVVVWATYRWGKTGTIASSF
SDSVAISEIENNRPFFSMIPGHFRLCKGYIVQDGYTYLRINDPLPVGSTYGNPGLLERTYGSSESTRIYVR

Sequences:

>Translated_391_residues
MIPAVSAQEEKDYSVTTENAFKHANANMISFIAAGTPGFENWTGASVDPNPLELYDINGKKLFFRFSVYKENKLIDTIDV
CADKTLGPSIYDIVFDPEPYKATEAMKKSIEIAKSEYSDGKIKSTNLVVYSYPRIGAMTVVKDKTTGIEHRIFVDAYSLN
EVEDKPATETEPGIWSMYDKILTNGKENNLKEWQKSDELAKSIEQAAANKGVNINAAVTEENIKKLSDEGVVKSSFTGKI
LDINGIGQERDVFCGPACIRMVCKYYNQPTPIPTQDTIYRGDGLWNWNPASIYTSGLSANDVVVWATYRWGKTGTIASSF
SDSVAISEIENNRPFFSMIPGHFRLCKGYIVQDGYTYLRINDPLPVGSTYGNPGLLERTYGSSESTRIYVR
>Mature_391_residues
MIPAVSAQEEKDYSVTTENAFKHANANMISFIAAGTPGFENWTGASVDPNPLELYDINGKKLFFRFSVYKENKLIDTIDV
CADKTLGPSIYDIVFDPEPYKATEAMKKSIEIAKSEYSDGKIKSTNLVVYSYPRIGAMTVVKDKTTGIEHRIFVDAYSLN
EVEDKPATETEPGIWSMYDKILTNGKENNLKEWQKSDELAKSIEQAAANKGVNINAAVTEENIKKLSDEGVVKSSFTGKI
LDINGIGQERDVFCGPACIRMVCKYYNQPTPIPTQDTIYRGDGLWNWNPASIYTSGLSANDVVVWATYRWGKTGTIASSF
SDSVAISEIENNRPFFSMIPGHFRLCKGYIVQDGYTYLRINDPLPVGSTYGNPGLLERTYGSSESTRIYVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43535; Mature: 43535

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPAVSAQEEKDYSVTTENAFKHANANMISFIAAGTPGFENWTGASVDPNPLELYDINGK
CCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCC
KLFFRFSVYKENKLIDTIDVCADKTLGPSIYDIVFDPEPYKATEAMKKSIEIAKSEYSDG
EEEEEEEEECCCCCEEHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC
KIKSTNLVVYSYPRIGAMTVVKDKTTGIEHRIFVDAYSLNEVEDKPATETEPGIWSMYDK
EEEECEEEEEECCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHH
ILTNGKENNLKEWQKSDELAKSIEQAAANKGVNINAAVTEENIKKLSDEGVVKSSFTGKI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCCEECCCCCEE
LDINGIGQERDVFCGPACIRMVCKYYNQPTPIPTQDTIYRGDGLWNWNPASIYTSGLSAN
EEECCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHEEECCCCCC
DVVVWATYRWGKTGTIASSFSDSVAISEIENNRPFFSMIPGHFRLCKGYIVQDGYTYLRI
CEEEEEEEECCCCCCCHHCCCCCEEEEECCCCCCEEEECCCHHEEEECEEEECCEEEEEE
NDPLPVGSTYGNPGLLERTYGSSESTRIYVR
CCCCCCCCCCCCCCCEEECCCCCCCCEEEEC
>Mature Secondary Structure
MIPAVSAQEEKDYSVTTENAFKHANANMISFIAAGTPGFENWTGASVDPNPLELYDINGK
CCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCC
KLFFRFSVYKENKLIDTIDVCADKTLGPSIYDIVFDPEPYKATEAMKKSIEIAKSEYSDG
EEEEEEEEECCCCCEEHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC
KIKSTNLVVYSYPRIGAMTVVKDKTTGIEHRIFVDAYSLNEVEDKPATETEPGIWSMYDK
EEEECEEEEEECCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHH
ILTNGKENNLKEWQKSDELAKSIEQAAANKGVNINAAVTEENIKKLSDEGVVKSSFTGKI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCCEECCCCCEE
LDINGIGQERDVFCGPACIRMVCKYYNQPTPIPTQDTIYRGDGLWNWNPASIYTSGLSAN
EEECCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHEEECCCCCC
DVVVWATYRWGKTGTIASSFSDSVAISEIENNRPFFSMIPGHFRLCKGYIVQDGYTYLRI
CEEEEEEEECCCCCCCHHCCCCCEEEEECCCCCCEEEECCCHHEEEECEEEECCEEEEEE
NDPLPVGSTYGNPGLLERTYGSSESTRIYVR
CCCCCCCCCCCCCCCEEECCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA