| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226499
Identifier: 21226499
GI number: 21226499
Start: 509921
End: 510205
Strand: Reverse
Name: 21226499
Synonym: MM_0397
Alternate gene names: NA
Gene position: 510205-509921 (Counterclockwise)
Preceding gene: 21226500
Following gene: 21226498
Centisome position: 12.46
GC content: 40.7
Gene sequence:
>285_bases ATGCTTACACGTGAAGAGATTCTTGCTTTGTGTGCTTCAAACCCTGAAGTCATTGCTTACATTGTGAGTCTTGAAACTCA AATTAAAGAACTTACTGAAAGGTTGATAGCCTTAGAATCTCGTTTAAACCAAAACAGTCGTAACAGCAGTCGCCCTCCTT CTACTGATTTTTTTGTCAAGGAGAAACCTAATCCCAAGAGTCTCCGTAAAAAGAGCGGAAAGAAACCTGGAGGTCAAGAT GGTCATCCTGGAACAACTCTTGAAATGGTTGATGATCCTGAGTAG
Upstream 100 bases:
>100_bases AATTTAATGTAACTATTCAGGCAGCCTTTTAAAGGCTACAATTTTTCCTCTTTTCGAGGAAAAATTGGATATAAATTGAA TCCTATTTTGTTTCGTTATC
Downstream 100 bases:
>100_bases GTAATAGAACATTCTTTGAGTTGCTGCAAAGAATGTGGCCATACTCTTGAGAATGTTGAAGTTGAAGCCTATGAGAAAAG ACAGGTCTTTGATATTCCTC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MLTREEILALCASNPEVIAYIVSLETQIKELTERLIALESRLNQNSRNSSRPPSTDFFVKEKPNPKSLRKKSGKKPGGQD GHPGTTLEMVDDPE
Sequences:
>Translated_94_residues MLTREEILALCASNPEVIAYIVSLETQIKELTERLIALESRLNQNSRNSSRPPSTDFFVKEKPNPKSLRKKSGKKPGGQD GHPGTTLEMVDDPE >Mature_94_residues MLTREEILALCASNPEVIAYIVSLETQIKELTERLIALESRLNQNSRNSSRPPSTDFFVKEKPNPKSLRKKSGKKPGGQD GHPGTTLEMVDDPE
Specific function: Unknown
COG id: COG3436
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10478; Mature: 10478
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTREEILALCASNPEVIAYIVSLETQIKELTERLIALESRLNQNSRNSSRPPSTDFFVK CCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE EKPNPKSLRKKSGKKPGGQDGHPGTTLEMVDDPE CCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure MLTREEILALCASNPEVIAYIVSLETQIKELTERLIALESRLNQNSRNSSRPPSTDFFVK CCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE EKPNPKSLRKKSGKKPGGQDGHPGTTLEMVDDPE CCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA