Click here to switch to the map view.

The map label for this gene is 21226498

Identifier: 21226498

GI number: 21226498

Start: 508772

End: 509905

Strand: Reverse

Name: 21226498

Synonym: MM_0396

Alternate gene names: NA

Gene position: 509905-508772 (Counterclockwise)

Preceding gene: 21226499

Following gene: 21226497

Centisome position: 12.45

GC content: 36.6

Gene sequence:

>1134_bases
TTGAGTTGCTGCAAAGAATGTGGCCATACTCTTGAGAATGTTGAAGTTGAAGCCTATGAGAAAAGACAGGTCTTTGATAT
TCCTCCTGTAAACCTGATTGTTACAGAACACAAAAGCCAGATTAAGACCTGTCCTCACTGTGGAAGAATAAATAAAGCTG
TTTTTCCTGAATCAGTAAAATATCCAGTTCAGTATGGTCCAAATATTTTAGCTTCAGCTATTTACTGTAAAAATCACCAT
TTTATCCCCTATGAAAGAATTTCTGAGTTTTTTGAGGATATTATGGGAATAAAAATCTGTCCTGCTACGATAATTAGAGC
AGAAAAAGAATGTTTCCAGAATTTAGAGTGTTTTGAAAACATTATTCGAGAGAAATTAATGACTTCTTATGTTGTCCATT
TTGATGAAACTGGTATGAAAATCGAAGGAAAAAGACACTGGCTTCATGTAGCTTCTAATGACAAATACACCTGTTATTTA
CCTCACTCAAAAAGAGGAGCAGAAGCAATAGACGCTATGGGAATTCTTCCGGAGTTTAAGGGAGTAGCAGTTCACGACGG
ATGGAAACCTTACAACGTTTATGACTGTGATCATGCTCTCTGTAATGCTCATTTACAGAGAGAACTTACTGGAATTGAAG
AGAACTATAAACAGCAGTGGGCTAAAGAAATGAATAAATTACTCACTGAGATGAAAAAGTATACTGATGAATGTAAGGAG
CAAGTCAAAGAACTGGACTTTGAGCAAATTAAAGCATTGGAAGAAAGGTTTGATGCTATAATCATGAAAGGGATTGAGGA
AAATCCACAATCTCTAAATCCTGAAAAACAAGGAAAACGTGGAAAGAATCCAAAGACAAAAGCAAGGAATCTGTTGGATA
GGTTTATAGAACACAAAGAAAAGATCCTGAGATTCCTGAAAGATTTGAAAGTTCCGTTTGAGAATAATCAGGCAGAAAGA
GATATCAGGATGATGAAACTACAGCAAAAGATATCAGGAACTTTCAGAACAACACAAGGAGCGCAAGCTTTCTGCAGAAT
GAGAGCTTACATCTCTACAATTAGAAAGAACGGATTACTTGTTTTGGAGGGTATTATAGCGGCGCTCAAGGGAGCGCCGT
TAACTATAACCTGA

Upstream 100 bases:

>100_bases
TCTCCGTAAAAAGAGCGGAAAGAAACCTGGAGGTCAAGATGGTCATCCTGGAACAACTCTTGAAATGGTTGATGATCCTG
AGTAGGTAATAGAACATTCT

Downstream 100 bases:

>100_bases
ATAGTTACAATTTAATTTATAAATAAAGTTATTCCATCCTGAAATTATCTCAACTGTAAGAGTCTATAAAAGGGAGGCTA
AAATGAAAGAAATAATATGT

Product: transposase

Products: NA

Alternate protein names: Transposase IS; Transposase Is; IS66 Family Element Transposase; Transposase Of; Archae-Like Transposase; Transposase Remnant

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSCCKECGHTLENVEVEAYEKRQVFDIPPVNLIVTEHKSQIKTCPHCGRINKAVFPESVKYPVQYGPNILASAIYCKNHH
FIPYERISEFFEDIMGIKICPATIIRAEKECFQNLECFENIIREKLMTSYVVHFDETGMKIEGKRHWLHVASNDKYTCYL
PHSKRGAEAIDAMGILPEFKGVAVHDGWKPYNVYDCDHALCNAHLQRELTGIEENYKQQWAKEMNKLLTEMKKYTDECKE
QVKELDFEQIKALEERFDAIIMKGIEENPQSLNPEKQGKRGKNPKTKARNLLDRFIEHKEKILRFLKDLKVPFENNQAER
DIRMMKLQQKISGTFRTTQGAQAFCRMRAYISTIRKNGLLVLEGIIAALKGAPLTIT

Sequences:

>Translated_377_residues
MSCCKECGHTLENVEVEAYEKRQVFDIPPVNLIVTEHKSQIKTCPHCGRINKAVFPESVKYPVQYGPNILASAIYCKNHH
FIPYERISEFFEDIMGIKICPATIIRAEKECFQNLECFENIIREKLMTSYVVHFDETGMKIEGKRHWLHVASNDKYTCYL
PHSKRGAEAIDAMGILPEFKGVAVHDGWKPYNVYDCDHALCNAHLQRELTGIEENYKQQWAKEMNKLLTEMKKYTDECKE
QVKELDFEQIKALEERFDAIIMKGIEENPQSLNPEKQGKRGKNPKTKARNLLDRFIEHKEKILRFLKDLKVPFENNQAER
DIRMMKLQQKISGTFRTTQGAQAFCRMRAYISTIRKNGLLVLEGIIAALKGAPLTIT
>Mature_376_residues
SCCKECGHTLENVEVEAYEKRQVFDIPPVNLIVTEHKSQIKTCPHCGRINKAVFPESVKYPVQYGPNILASAIYCKNHHF
IPYERISEFFEDIMGIKICPATIIRAEKECFQNLECFENIIREKLMTSYVVHFDETGMKIEGKRHWLHVASNDKYTCYLP
HSKRGAEAIDAMGILPEFKGVAVHDGWKPYNVYDCDHALCNAHLQRELTGIEENYKQQWAKEMNKLLTEMKKYTDECKEQ
VKELDFEQIKALEERFDAIIMKGIEENPQSLNPEKQGKRGKNPKTKARNLLDRFIEHKEKILRFLKDLKVPFENNQAERD
IRMMKLQQKISGTFRTTQGAQAFCRMRAYISTIRKNGLLVLEGIIAALKGAPLTIT

Specific function: Unknown

COG id: COG3436

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43679; Mature: 43548

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCCKECGHTLENVEVEAYEKRQVFDIPPVNLIVTEHKSQIKTCPHCGRINKAVFPESVK
CCHHHHHCCHHHCCCHHHHHCCCEECCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCC
YPVQYGPNILASAIYCKNHHFIPYERISEFFEDIMGIKICPATIIRAEKECFQNLECFEN
CCHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHH
IIREKLMTSYVVHFDETGMKIEGKRHWLHVASNDKYTCYLPHSKRGAEAIDAMGILPEFK
HHHHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCCC
GVAVHDGWKPYNVYDCDHALCNAHLQRELTGIEENYKQQWAKEMNKLLTEMKKYTDECKE
CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVKELDFEQIKALEERFDAIIMKGIEENPQSLNPEKQGKRGKNPKTKARNLLDRFIEHKE
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHH
KILRFLKDLKVPFENNQAERDIRMMKLQQKISGTFRTTQGAQAFCRMRAYISTIRKNGLL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
VLEGIIAALKGAPLTIT
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SCCKECGHTLENVEVEAYEKRQVFDIPPVNLIVTEHKSQIKTCPHCGRINKAVFPESVK
CHHHHHCCHHHCCCHHHHHCCCEECCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCC
YPVQYGPNILASAIYCKNHHFIPYERISEFFEDIMGIKICPATIIRAEKECFQNLECFEN
CCHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHH
IIREKLMTSYVVHFDETGMKIEGKRHWLHVASNDKYTCYLPHSKRGAEAIDAMGILPEFK
HHHHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCCC
GVAVHDGWKPYNVYDCDHALCNAHLQRELTGIEENYKQQWAKEMNKLLTEMKKYTDECKE
CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVKELDFEQIKALEERFDAIIMKGIEENPQSLNPEKQGKRGKNPKTKARNLLDRFIEHKE
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHH
KILRFLKDLKVPFENNQAERDIRMMKLQQKISGTFRTTQGAQAFCRMRAYISTIRKNGLL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
VLEGIIAALKGAPLTIT
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA