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The map label for this gene is ywhL [H]

Identifier: 21226492

GI number: 21226492

Start: 500539

End: 501816

Strand: Reverse

Name: ywhL [H]

Synonym: MM_0390

Alternate gene names: 21226492

Gene position: 501816-500539 (Counterclockwise)

Preceding gene: 21226493

Following gene: 21226488

Centisome position: 12.25

GC content: 41.31

Gene sequence:

>1278_bases
ATGTCTAATAAAGCACGCAGAAAAGATACCCTCATAAGAGTTTTGGGAATAACTGCACTTGCAATTTTAATACTGACGGG
CGTAGCAGGTGCAGCTCCATTTGCATATGTGACAAGTCTGGGAGTCGACACTGGAACTGTCTTTGTAATTGATACAACGA
CTAACAATCTTACAGCCGTGGTACCTGTAGAAGGCTGGCCCTTTGGAGTTGCAATCAACCCTGCAGGAACAAAGGTGTAT
GTGGCGGACTTGTCAGGCACAAGCACCACTGTCTCTGTAATTGACACTGCGACAAATACGGTTGAAGCTGTGGTGGATGT
AGGAGGTTATCCTCGGGGAGTTGCAGTCGATCCGACAGGATCAAGGGTTTATGTGACAAATCGTTACAGCGTGGTGGATA
ATGACAGCAACAATGTCTCTGTAATTGACACATCCACAAACAGTGTAGTGGGCACGGTTAATGTGGGGCTGAGTACTTAT
AACGTTGCATTTACACCAGATGGGAAAAAAATTTATGCTACAAACAGTCGCAACAACACTACTTCTGTAATTGATGCTAC
TACAAACAAAGTTACAGACACTGTACCTGTAGGAGACCATCCTACTGATATTGCAATCAGTCCTGATGGAAATAAGGTGT
ACGTAACTAATTCAGGCAGCAACAATGTTTCTGTAATTGATACAGCTACAAACACAGTTACAACCACTGTGCCGGTAGGA
GACGATCCCTGTGACGTTGCATTCAGTTCTGATGGAAAAAAGGCATATGTGCCAAATAAACGAAGCGACAATGTTTCTGT
AATTGACACAGCAACAAACACTGTTACAGCCACAGTTCCTGTAGGAATTACTCCTTTAGGAGTTGCAGTCACTCCAGATG
GAAATAAGGTATATGTGACAAACGCCGAAAGCGACAATGTCTCTATAATTAACACAGCCACAAACAAAGTTACAGCTATG
GTGAATACAGGAAAATATTATATGAACTATCCTATTGGAGTTGTAATTGTGCCTTTTATGGATTCTAATATGACTGATCA
AAGCATAGGGGCAACCTCCAATGCAACTGAAGACATAGGAGTTGAAGAAACTAACTTATCATCATCTGAAGAAAAAAACG
CTGTCGAACTAAATAATTCAAACAATAATAATTCCGAATCTAATAATGGTAGTAGTTCAAATGGAAATGAATCAAACAAA
AATAACTCTACTCCAGGCTTCGGATTATTGGGGAGCTTGACCTGCCTGTATGGTGGATGGAAACTCGGGAAGAAGTAA

Upstream 100 bases:

>100_bases
GGCATGAAAGACAAACACTGATCAGGGAAAAAAGATGAAAATTAAAACTATATCAACAATACCGATTGACACTTTTTCGA
TTTCACTCCCACCTGTAGCA

Downstream 100 bases:

>100_bases
TAAAGGGCTTGGACAACCCAAAGTCACTGGCATTAATGATCCAATGACTGTTGGGTCGAATGGTACGCCAAAAATTGAAT
TCCCCACAAGTCAAGAAAAA

Product: putative surface layer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSNKARRKDTLIRVLGITALAILILTGVAGAAPFAYVTSLGVDTGTVFVIDTTTNNLTAVVPVEGWPFGVAINPAGTKVY
VADLSGTSTTVSVIDTATNTVEAVVDVGGYPRGVAVDPTGSRVYVTNRYSVVDNDSNNVSVIDTSTNSVVGTVNVGLSTY
NVAFTPDGKKIYATNSRNNTTSVIDATTNKVTDTVPVGDHPTDIAISPDGNKVYVTNSGSNNVSVIDTATNTVTTTVPVG
DDPCDVAFSSDGKKAYVPNKRSDNVSVIDTATNTVTATVPVGITPLGVAVTPDGNKVYVTNAESDNVSIINTATNKVTAM
VNTGKYYMNYPIGVVIVPFMDSNMTDQSIGATSNATEDIGVEETNLSSSEEKNAVELNNSNNNNSESNNGSSSNGNESNK
NNSTPGFGLLGSLTCLYGGWKLGKK

Sequences:

>Translated_425_residues
MSNKARRKDTLIRVLGITALAILILTGVAGAAPFAYVTSLGVDTGTVFVIDTTTNNLTAVVPVEGWPFGVAINPAGTKVY
VADLSGTSTTVSVIDTATNTVEAVVDVGGYPRGVAVDPTGSRVYVTNRYSVVDNDSNNVSVIDTSTNSVVGTVNVGLSTY
NVAFTPDGKKIYATNSRNNTTSVIDATTNKVTDTVPVGDHPTDIAISPDGNKVYVTNSGSNNVSVIDTATNTVTTTVPVG
DDPCDVAFSSDGKKAYVPNKRSDNVSVIDTATNTVTATVPVGITPLGVAVTPDGNKVYVTNAESDNVSIINTATNKVTAM
VNTGKYYMNYPIGVVIVPFMDSNMTDQSIGATSNATEDIGVEETNLSSSEEKNAVELNNSNNNNSESNNGSSSNGNESNK
NNSTPGFGLLGSLTCLYGGWKLGKK
>Mature_424_residues
SNKARRKDTLIRVLGITALAILILTGVAGAAPFAYVTSLGVDTGTVFVIDTTTNNLTAVVPVEGWPFGVAINPAGTKVYV
ADLSGTSTTVSVIDTATNTVEAVVDVGGYPRGVAVDPTGSRVYVTNRYSVVDNDSNNVSVIDTSTNSVVGTVNVGLSTYN
VAFTPDGKKIYATNSRNNTTSVIDATTNKVTDTVPVGDHPTDIAISPDGNKVYVTNSGSNNVSVIDTATNTVTTTVPVGD
DPCDVAFSSDGKKAYVPNKRSDNVSVIDTATNTVTATVPVGITPLGVAVTPDGNKVYVTNAESDNVSIINTATNKVTAMV
NTGKYYMNYPIGVVIVPFMDSNMTDQSIGATSNATEDIGVEETNLSSSEEKNAVELNNSNNNNSESNNGSSSNGNESNKN
NSTPGFGLLGSLTCLYGGWKLGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787724, Length=273, Percent_Identity=24.9084249084249, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011045
- InterPro:   IPR015943
- InterPro:   IPR011964 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44047; Mature: 43916

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKARRKDTLIRVLGITALAILILTGVAGAAPFAYVTSLGVDTGTVFVIDTTTNNLTAV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCEEEEEECCCCCEEEE
VPVEGWPFGVAINPAGTKVYVADLSGTSTTVSVIDTATNTVEAVVDVGGYPRGVAVDPTG
EEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEHEECCCCCCCEEECCCC
SRVYVTNRYSVVDNDSNNVSVIDTSTNSVVGTVNVGLSTYNVAFTPDGKKIYATNSRNNT
CEEEEEEEEEEEECCCCCEEEEECCCCCEEEEEEECEEEEEEEECCCCCEEEEECCCCCE
TSVIDATTNKVTDTVPVGDHPTDIAISPDGNKVYVTNSGSNNVSVIDTATNTVTTTVPVG
EEEEECCCCCCEEEECCCCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEEECC
DDPCDVAFSSDGKKAYVPNKRSDNVSVIDTATNTVTATVPVGITPLGVAVTPDGNKVYVT
CCCCCEEECCCCCEEECCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEE
NAESDNVSIINTATNKVTAMVNTGKYYMNYPIGVVIVPFMDSNMTDQSIGATSNATEDIG
CCCCCCEEEEEECCCEEEEEEECCEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
VEETNLSSSEEKNAVELNNSNNNNSESNNGSSSNGNESNKNNSTPGFGLLGSLTCLYGGW
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECCE
KLGKK
ECCCC
>Mature Secondary Structure 
SNKARRKDTLIRVLGITALAILILTGVAGAAPFAYVTSLGVDTGTVFVIDTTTNNLTAV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCEEEEEECCCCCEEEE
VPVEGWPFGVAINPAGTKVYVADLSGTSTTVSVIDTATNTVEAVVDVGGYPRGVAVDPTG
EEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEHEECCCCCCCEEECCCC
SRVYVTNRYSVVDNDSNNVSVIDTSTNSVVGTVNVGLSTYNVAFTPDGKKIYATNSRNNT
CEEEEEEEEEEEECCCCCEEEEECCCCCEEEEEEECEEEEEEEECCCCCEEEEECCCCCE
TSVIDATTNKVTDTVPVGDHPTDIAISPDGNKVYVTNSGSNNVSVIDTATNTVTTTVPVG
EEEEECCCCCCEEEECCCCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEEECC
DDPCDVAFSSDGKKAYVPNKRSDNVSVIDTATNTVTATVPVGITPLGVAVTPDGNKVYVT
CCCCCEEECCCCCEEECCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEE
NAESDNVSIINTATNKVTAMVNTGKYYMNYPIGVVIVPFMDSNMTDQSIGATSNATEDIG
CCCCCCEEEEEECCCEEEEEEECCEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
VEETNLSSSEEKNAVELNNSNNNNSESNNGSSSNGNESNKNNSTPGFGLLGSLTCLYGGW
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECCE
KLGKK
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]