| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226488
Identifier: 21226488
GI number: 21226488
Start: 495242
End: 495643
Strand: Reverse
Name: 21226488
Synonym: MM_0386
Alternate gene names: NA
Gene position: 495643-495242 (Counterclockwise)
Preceding gene: 21226492
Following gene: 21226487
Centisome position: 12.1
GC content: 44.03
Gene sequence:
>402_bases ATGATAGTTGTGGCAGATAATGGGCTAACATTAGAAGGCAATGATTTTAAAATGGGAGAGGTAGAGTACGAAATGGTCGA GCTTCTAAGGAGGCTCAATATAAACAGGCCTGTCGCCCTGACCCTTGCATGTCTCTCAAAAGGGGAAGAAATTTCTTCCC AGTGTATAGAAATGGTATCAGGTCTAAGGCAACCTGAAGTCAGCATTGCAATGCGTTACCTTCGTGAGAACGACTGGGTA GACATGAGGGAAGAAAAAAAGAACCACGGCAAAGGCAGACCTGTAAAGCTCTACAGGCTGACGGTCCAGATGGAAACGAT TATCAACACAATTGAAGAAAGCGTCATTGCTGAGAGCAAAACTATTCTCCAGAACATAGAACGTCTCAAGCATCTATCCT GA
Upstream 100 bases:
>100_bases AAATTATTCGTTTAAAATAATATATTTCTATTTATCTGATGATACTGGATAAGATAAGATACCGGAATAGACTCAAGGAA ATTACCGGTATAAACGGCAG
Downstream 100 bases:
>100_bases AAAATCGGCGAAAAAGACAGGTTAAAGCAGTTTTTTCTTTAAAATCACATATGCAAAAAGTATATTCTTAAATCAAAAAT ACGATTATATCAATGGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator Protein
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MIVVADNGLTLEGNDFKMGEVEYEMVELLRRLNINRPVALTLACLSKGEEISSQCIEMVSGLRQPEVSIAMRYLRENDWV DMREEKKNHGKGRPVKLYRLTVQMETIINTIEESVIAESKTILQNIERLKHLS
Sequences:
>Translated_133_residues MIVVADNGLTLEGNDFKMGEVEYEMVELLRRLNINRPVALTLACLSKGEEISSQCIEMVSGLRQPEVSIAMRYLRENDWV DMREEKKNHGKGRPVKLYRLTVQMETIINTIEESVIAESKTILQNIERLKHLS >Mature_133_residues MIVVADNGLTLEGNDFKMGEVEYEMVELLRRLNINRPVALTLACLSKGEEISSQCIEMVSGLRQPEVSIAMRYLRENDWV DMREEKKNHGKGRPVKLYRLTVQMETIINTIEESVIAESKTILQNIERLKHLS
Specific function: Unknown
COG id: COG4738
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15290; Mature: 15290
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVVADNGLTLEGNDFKMGEVEYEMVELLRRLNINRPVALTLACLSKGEEISSQCIEMVS CEEECCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHH GLRQPEVSIAMRYLRENDWVDMREEKKNHGKGRPVKLYRLTVQMETIINTIEESVIAESK CCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH TILQNIERLKHLS HHHHHHHHHHCCC >Mature Secondary Structure MIVVADNGLTLEGNDFKMGEVEYEMVELLRRLNINRPVALTLACLSKGEEISSQCIEMVS CEEECCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHH GLRQPEVSIAMRYLRENDWVDMREEKKNHGKGRPVKLYRLTVQMETIINTIEESVIAESK CCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH TILQNIERLKHLS HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA