| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226465
Identifier: 21226465
GI number: 21226465
Start: 470083
End: 470421
Strand: Direct
Name: 21226465
Synonym: MM_0363
Alternate gene names: NA
Gene position: 470083-470421 (Clockwise)
Preceding gene: 21226464
Following gene: 21226466
Centisome position: 11.48
GC content: 47.49
Gene sequence:
>339_bases ATGAATGTTATTGAGATGAAATCTTCGCCGGAAAAACCCAATCCTCACAATGTGAGCGTAAGGATGCTCTATGATAGGGA AAATGCCCAGGCAGTACATATCGAACTCAAGCCAGGGGAAGCCTTAAAAAAGCATATCACACCAGTCGATGTTTTTTTCT ATATTCTCGAAGGAAAAGGCGTGGTTGAGATAGGGGATGAACAGGAAGAAGTAAGCAGAGACATGCTGATCGAAAGCCCT GCAAAAATTCCCCACCGCCTCCTGAACCCCGGGGACGGAATCTTCAGGGTACTTGTGGTAAAAGCACCGAGGCAGACTGA GTCCACTCGCCTGCTGTGA
Upstream 100 bases:
>100_bases GTATGTATATACTGGATAAATCAGTGCCCGGCTAAAAAATAAGGGCACTCTGAAAAATACAGTAGAAAAACAAACATAAA TGGTCAAAGGGGAGAGTCAT
Downstream 100 bases:
>100_bases GATTCGAGATTTAAGTTCATCAAAGGGCTGTCAAAAAGTGACTGAGGAGACAAAGCCAATAAAAATCGCAGTCATACGCT GTGATATCGTCTCGGAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin Region; Cupin Family Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Domain-Containing Protein
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MNVIEMKSSPEKPNPHNVSVRMLYDRENAQAVHIELKPGEALKKHITPVDVFFYILEGKGVVEIGDEQEEVSRDMLIESP AKIPHRLLNPGDGIFRVLVVKAPRQTESTRLL
Sequences:
>Translated_112_residues MNVIEMKSSPEKPNPHNVSVRMLYDRENAQAVHIELKPGEALKKHITPVDVFFYILEGKGVVEIGDEQEEVSRDMLIESP AKIPHRLLNPGDGIFRVLVVKAPRQTESTRLL >Mature_112_residues MNVIEMKSSPEKPNPHNVSVRMLYDRENAQAVHIELKPGEALKKHITPVDVFFYILEGKGVVEIGDEQEEVSRDMLIESP AKIPHRLLNPGDGIFRVLVVKAPRQTESTRLL
Specific function: Unknown
COG id: COG0662
COG function: function code G; Mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12682; Mature: 12682
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVIEMKSSPEKPNPHNVSVRMLYDRENAQAVHIELKPGEALKKHITPVDVFFYILEGKG CCEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCHHHHHHCCHHHEEEEEECCCC VVEIGDEQEEVSRDMLIESPAKIPHRLLNPGDGIFRVLVVKAPRQTESTRLL EEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MNVIEMKSSPEKPNPHNVSVRMLYDRENAQAVHIELKPGEALKKHITPVDVFFYILEGKG CCEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCHHHHHHCCHHHEEEEEECCCC VVEIGDEQEEVSRDMLIESPAKIPHRLLNPGDGIFRVLVVKAPRQTESTRLL EEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA