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The map label for this gene is ytfH [C]

Identifier: 21226463

GI number: 21226463

Start: 468460

End: 468816

Strand: Reverse

Name: ytfH [C]

Synonym: MM_0361

Alternate gene names: 21226463

Gene position: 468816-468460 (Counterclockwise)

Preceding gene: 21226469

Following gene: 21226461

Centisome position: 11.44

GC content: 37.54

Gene sequence:

>357_bases
ATGAAAGACTGCACAGTCTACAAGACCATGAATATTATCGGGAAAAGGTGGACAATTCATATCCTCCTTGAGCTGCACAA
AGGAGAGAAAAAAGAAAAGCGTTTCAATGAGCTGAAAAGAAAACTCGGATACATAACTCCAAAAATCCTTTCGGAAAGGC
TTACAGAGCTTGAGAATGAAGGTCTGATTGCAAAAAAAATTGATGATTCTACAAACCCTCCGAAGTCAGAATATTACCTT
ACTGAAAGCGGAAATGATTTTGTAAAAATAATACAGGCAATAAAACGCTGGGGGTTAAAATGGAAATTCCAGAATGAAGA
GTGCGAGAGATTGGTTTGCAAGTACTGTGAGCATTAA

Upstream 100 bases:

>100_bases
AAGGATTTTATTATAAATTACTGTTTTATAATAGTATCCTTTTGATACCAGTATATTAGAGATACTAATTTATATATCAG
ACAGTTTCTATCTTTATACC

Downstream 100 bases:

>100_bases
AAGCAAAAACATGAAAAAAGAGAAAAATGAGGGAAAAAACCGAGGAAAGAATGCTTTTTATTTTTCCCAGAGGCCCACTT
CTTTTTTGAATTCTTCAAGA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKDCTVYKTMNIIGKRWTIHILLELHKGEKKEKRFNELKRKLGYITPKILSERLTELENEGLIAKKIDDSTNPPKSEYYL
TESGNDFVKIIQAIKRWGLKWKFQNEECERLVCKYCEH

Sequences:

>Translated_118_residues
MKDCTVYKTMNIIGKRWTIHILLELHKGEKKEKRFNELKRKLGYITPKILSERLTELENEGLIAKKIDDSTNPPKSEYYL
TESGNDFVKIIQAIKRWGLKWKFQNEECERLVCKYCEH
>Mature_118_residues
MKDCTVYKTMNIIGKRWTIHILLELHKGEKKEKRFNELKRKLGYITPKILSERLTELENEGLIAKKIDDSTNPPKSEYYL
TESGNDFVKIIQAIKRWGLKWKFQNEECERLVCKYCEH

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14106; Mature: 14106

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDCTVYKTMNIIGKRWTIHILLELHKGEKKEKRFNELKRKLGYITPKILSERLTELENE
CCCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
GLIAKKIDDSTNPPKSEYYLTESGNDFVKIIQAIKRWGLKWKFQNEECERLVCKYCEH
CCEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCC
>Mature Secondary Structure
MKDCTVYKTMNIIGKRWTIHILLELHKGEKKEKRFNELKRKLGYITPKILSERLTELENE
CCCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
GLIAKKIDDSTNPPKSEYYLTESGNDFVKIIQAIKRWGLKWKFQNEECERLVCKYCEH
CCEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10086842; 11058132 [H]