Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226469

Identifier: 21226469

GI number: 21226469

Start: 472177

End: 472731

Strand: Reverse

Name: 21226469

Synonym: MM_0367

Alternate gene names: NA

Gene position: 472731-472177 (Counterclockwise)

Preceding gene: 21226478

Following gene: 21226463

Centisome position: 11.54

GC content: 42.16

Gene sequence:

>555_bases
ATGAGGCCAACAGACGATCTGAGAGAAGAACACAGGGCTGTCGAACTGATGCTGGAAATACTTGACAGCGTATGCACGAA
TATAGAGTCAGGAAAAAGTGTTGAACAGGAGCATCTTGAGAAACTCGTGGAGTTCATGAGAATATTCGTTGATAAATGCC
ATCACACAAAGGAAGAGGCTCATCTTTTTCCTGAAATGGTAAAGAGAGAAATTCCAGGCACAGGAGAACTAATTGATTCT
CTTTTGAAGGAACATAACCAGGCAAGGGAATATGTCGGCAGGATAGAAAAAACGGTTTCCGGAAAGGAATGGGATAAAAA
AGGTTCTGGAATAGTTGAGAACTCAAGGGCATATATTCAACTTCTGGCGCAGCATATCGAGAAAGAGAATAATGGCCTTT
TCCCAAAAGCTGACGCATACCTTGATTCGGGAGTCCAGAAAGAGTTACTTGACTCTTTTGAACGTGTAGAAGATGAAGAA
ATAGGTGCAGGCAAGCATGAAAAATTCCACCTGCTCCTGCACGAGCTCAAAGATATATATTTAAAGTCCGCGTGA

Upstream 100 bases:

>100_bases
GAAATTAGAACTTACAAAAAAGCAGGCAGCAGGAGAATAAACATAACCGGATATCCGAAAGAAGCCGGGTTTCAAATTAC
TGGAAAATGGTGGGGAAAAT

Downstream 100 bases:

>100_bases
AATCTCGCCCTAGTCCCGTCTCGGGAGGTCGGTGTCCTTTCCGCCTCGAATCGCGCCTCGGGAGGACGGTGTCCTTTTCG
CTCGCTTTGCTCTCTCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MRPTDDLREEHRAVELMLEILDSVCTNIESGKSVEQEHLEKLVEFMRIFVDKCHHTKEEAHLFPEMVKREIPGTGELIDS
LLKEHNQAREYVGRIEKTVSGKEWDKKGSGIVENSRAYIQLLAQHIEKENNGLFPKADAYLDSGVQKELLDSFERVEDEE
IGAGKHEKFHLLLHELKDIYLKSA

Sequences:

>Translated_184_residues
MRPTDDLREEHRAVELMLEILDSVCTNIESGKSVEQEHLEKLVEFMRIFVDKCHHTKEEAHLFPEMVKREIPGTGELIDS
LLKEHNQAREYVGRIEKTVSGKEWDKKGSGIVENSRAYIQLLAQHIEKENNGLFPKADAYLDSGVQKELLDSFERVEDEE
IGAGKHEKFHLLLHELKDIYLKSA
>Mature_184_residues
MRPTDDLREEHRAVELMLEILDSVCTNIESGKSVEQEHLEKLVEFMRIFVDKCHHTKEEAHLFPEMVKREIPGTGELIDS
LLKEHNQAREYVGRIEKTVSGKEWDKKGSGIVENSRAYIQLLAQHIEKENNGLFPKADAYLDSGVQKELLDSFERVEDEE
IGAGKHEKFHLLLHELKDIYLKSA

Specific function: Unknown

COG id: COG3945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21263; Mature: 21263

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPTDDLREEHRAVELMLEILDSVCTNIESGKSVEQEHLEKLVEFMRIFVDKCHHTKEEA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
HLFPEMVKREIPGTGELIDSLLKEHNQAREYVGRIEKTVSGKEWDKKGSGIVENSRAYIQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LLAQHIEKENNGLFPKADAYLDSGVQKELLDSFERVEDEEIGAGKHEKFHLLLHELKDIY
HHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHH
LKSA
HCCC
>Mature Secondary Structure
MRPTDDLREEHRAVELMLEILDSVCTNIESGKSVEQEHLEKLVEFMRIFVDKCHHTKEEA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
HLFPEMVKREIPGTGELIDSLLKEHNQAREYVGRIEKTVSGKEWDKKGSGIVENSRAYIQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LLAQHIEKENNGLFPKADAYLDSGVQKELLDSFERVEDEEIGAGKHEKFHLLLHELKDIY
HHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHH
LKSA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA