Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226393
Identifier: 21226393
GI number: 21226393
Start: 390339
End: 390560
Strand: Reverse
Name: 21226393
Synonym: MM_0291
Alternate gene names: NA
Gene position: 390560-390339 (Counterclockwise)
Preceding gene: 21226394
Following gene: 21226387
Centisome position: 9.53
GC content: 47.75
Gene sequence:
>222_bases GTGAAAACCTATCTTGTGGTCTGGTTTAGTAGCGAGGGAGTCCGTCCGTCTGAGGTCAACCAGAGGCTGCTGTCCCTGGG CTTTGAGCCCATGCAGGGCAGCTATGATTTTGTATATAACTGGAACAGCAATGTTGGTGTTGAAAAGATTCTCGAGTTTG GGGACAAAGTTTATCTGAGCCTTCAGGGCACCGGTGTAATGTTCAAACTGGAGACTATGTAA
Upstream 100 bases:
>100_bases TCTTGATAAATAAACGAAGCAGATATAAAATAAGTATTGTGTGCTTGAATTAGAACCTGTGCTAAAATTTATCAGTCAAT CAATAAAATGAGATGATCCT
Downstream 100 bases:
>100_bases ATTTTTGGTTTACTGAATAAGCAGTTCCAGAGACCTCACCTAGCGAGGCATGTGCCTAGTTCCGGCATTTAAGATTCCTT CAGTTTCCCGGAATCTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MKTYLVVWFSSEGVRPSEVNQRLLSLGFEPMQGSYDFVYNWNSNVGVEKILEFGDKVYLSLQGTGVMFKLETM
Sequences:
>Translated_73_residues MKTYLVVWFSSEGVRPSEVNQRLLSLGFEPMQGSYDFVYNWNSNVGVEKILEFGDKVYLSLQGTGVMFKLETM >Mature_73_residues MKTYLVVWFSSEGVRPSEVNQRLLSLGFEPMQGSYDFVYNWNSNVGVEKILEFGDKVYLSLQGTGVMFKLETM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8392; Mature: 8392
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYLVVWFSSEGVRPSEVNQRLLSLGFEPMQGSYDFVYNWNSNVGVEKILEFGDKVYLS CCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHCCCEEEEE LQGTGVMFKLETM EECCEEEEEEECC >Mature Secondary Structure MKTYLVVWFSSEGVRPSEVNQRLLSLGFEPMQGSYDFVYNWNSNVGVEKILEFGDKVYLS CCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHCCCEEEEE LQGTGVMFKLETM EECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA