Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226387
Identifier: 21226387
GI number: 21226387
Start: 384738
End: 385388
Strand: Reverse
Name: 21226387
Synonym: MM_0285
Alternate gene names: NA
Gene position: 385388-384738 (Counterclockwise)
Preceding gene: 21226393
Following gene: 21226386
Centisome position: 9.41
GC content: 46.39
Gene sequence:
>651_bases ATGGCAGAGAAACTCAACCTTAAAGTTATGGAACTGCTCAATGGCAGGCGGCTCTCAATAAGTGGGCTCACGCGGGAACT GAAAGCTGAGGGAATAGAAGAACACAGGCTGGTTCTCACGGGCTACCTCAGGGCACTCAGAGATCTTGAATTACTGGACG AAGTTGAGGTCCCCCCTTCGAAAATTTATACTCTGCCTGAAAAAAACAAAGATCTTTTGCCGGATAAAGGCAGGGAAGTA AGGCCTGCGGACCCTTCTGATCCAGAAGACATTTATCTCATTTTCAGGAACCAGCTCCTTAAAATTGACCTTGACTTCAG GATTCCTGTCGGAGTGTATGTAATTTCCCGGCTTTTCGAGAGGCCCTGTTTCCGCAGAGAGTTAAAACTTGTAGGAATTA CCCAGAAGCACCTTGACCGGTACATGGAAAAACCCGGAATTGTTTGTGAAGCCTCTGACTCGCACCTGAAAAAAGCCAGA GCCGATATCACAAAAATTGAGATACCTCCTGATGACCCTGCATATGAAATACGCGAAAACAGGGAAGAGGTAACAAAGCT TGCAAATGAAGTGCTTGCAGGCATGATAAAACACAGGATAGACCTTGAAGGGCTCGTAGCAAAAAGTAAGCAAACTACCC TGCTGCCCTGA
Upstream 100 bases:
>100_bases ATTACCCGGTTATTGTAGCAGGAGATTGTGTTTTTTCCGGCCCCGGGCCTGAAGACAACTACCATTAAATAACCTTCATC TTGATATAAAGGCAGAGAAA
Downstream 100 bases:
>100_bases AAGCCTTTATGCAGATTCTTTGCAGGTCCCGAACCCTGAAACCTTTTACCTGTCCGAACCAGGAACGATCTTTAATCAAA CCTCATGGTCATAAATATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MAEKLNLKVMELLNGRRLSISGLTRELKAEGIEEHRLVLTGYLRALRDLELLDEVEVPPSKIYTLPEKNKDLLPDKGREV RPADPSDPEDIYLIFRNQLLKIDLDFRIPVGVYVISRLFERPCFRRELKLVGITQKHLDRYMEKPGIVCEASDSHLKKAR ADITKIEIPPDDPAYEIRENREEVTKLANEVLAGMIKHRIDLEGLVAKSKQTTLLP
Sequences:
>Translated_216_residues MAEKLNLKVMELLNGRRLSISGLTRELKAEGIEEHRLVLTGYLRALRDLELLDEVEVPPSKIYTLPEKNKDLLPDKGREV RPADPSDPEDIYLIFRNQLLKIDLDFRIPVGVYVISRLFERPCFRRELKLVGITQKHLDRYMEKPGIVCEASDSHLKKAR ADITKIEIPPDDPAYEIRENREEVTKLANEVLAGMIKHRIDLEGLVAKSKQTTLLP >Mature_215_residues AEKLNLKVMELLNGRRLSISGLTRELKAEGIEEHRLVLTGYLRALRDLELLDEVEVPPSKIYTLPEKNKDLLPDKGREVR PADPSDPEDIYLIFRNQLLKIDLDFRIPVGVYVISRLFERPCFRRELKLVGITQKHLDRYMEKPGIVCEASDSHLKKARA DITKIEIPPDDPAYEIRENREEVTKLANEVLAGMIKHRIDLEGLVAKSKQTTLLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24843; Mature: 24712
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKLNLKVMELLNGRRLSISGLTRELKAEGIEEHRLVLTGYLRALRDLELLDEVEVPPS CCCCHHHHHHHHHCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH KIYTLPEKNKDLLPDKGREVRPADPSDPEDIYLIFRNQLLKIDLDFRIPVGVYVISRLFE HEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECEECCHHHHHHHHHHH RPCFRRELKLVGITQKHLDRYMEKPGIVCEASDSHLKKARADITKIEIPPDDPAYEIREN CCHHHHHHHHCCCCHHHHHHHHHCCCCEEECCHHHHHHHHCCCEEEECCCCCCHHHHHCC REEVTKLANEVLAGMIKHRIDLEGLVAKSKQTTLLP HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC >Mature Secondary Structure AEKLNLKVMELLNGRRLSISGLTRELKAEGIEEHRLVLTGYLRALRDLELLDEVEVPPS CCCHHHHHHHHHCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH KIYTLPEKNKDLLPDKGREVRPADPSDPEDIYLIFRNQLLKIDLDFRIPVGVYVISRLFE HEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECEECCHHHHHHHHHHH RPCFRRELKLVGITQKHLDRYMEKPGIVCEASDSHLKKARADITKIEIPPDDPAYEIREN CCHHHHHHHHCCCCHHHHHHHHHCCCCEEECCHHHHHHHHCCCEEEECCCCCCHHHHHCC REEVTKLANEVLAGMIKHRIDLEGLVAKSKQTTLLP HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA