Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226382
Identifier: 21226382
GI number: 21226382
Start: 377774
End: 378106
Strand: Direct
Name: 21226382
Synonym: MM_0280
Alternate gene names: NA
Gene position: 377774-378106 (Clockwise)
Preceding gene: 21226381
Following gene: 21226383
Centisome position: 9.22
GC content: 42.04
Gene sequence:
>333_bases ATGGTATCGGAACTTGCTGCTGTAATCCTGGGGATTTTCGTACAGTTTTTTGAAATTGTCAGTGCAGTCCTGATAGTTTT TGGGGGGTTAAGAGCTGCACTTGAAATCTTGCTTGTCGAGGCTTTCAGGAAACCTTACAGTTATGAACACATAAGGAAGA AGTTTACAAATAAAATATTTTTCGGGCTTGAGCTTCTGATAGTTGCAGATGTGCTTGAGACCCTGAGAAAGCCTTCTCTG GAGGAACTGTTCCTTGTAGGAGCTATCGTGGTAATAAGGTCTTACCTGGGCTACTTCTTAAGTAAAGAAGCCGAAGAGTA CCAGTTTGACTGA
Upstream 100 bases:
>100_bases TATTAACCGGCAAAAATGGGAAAAACTGACAGACTGCGGTCTATTAAAAAGTTCAGTTTGAACCGAACGGATCTGGGGGA CATTTCTGGCAGGGTAAAGG
Downstream 100 bases:
>100_bases AACCCGCGGTCCGGTGAAATATAAGAAAATGCCTTATTGAAAGGATAAATGTCGTAATGTCGTATTGAAAGGGTGAAAGG GTAAATGTCGTATTGAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MVSELAAVILGIFVQFFEIVSAVLIVFGGLRAALEILLVEAFRKPYSYEHIRKKFTNKIFFGLELLIVADVLETLRKPSL EELFLVGAIVVIRSYLGYFLSKEAEEYQFD
Sequences:
>Translated_110_residues MVSELAAVILGIFVQFFEIVSAVLIVFGGLRAALEILLVEAFRKPYSYEHIRKKFTNKIFFGLELLIVADVLETLRKPSL EELFLVGAIVVIRSYLGYFLSKEAEEYQFD >Mature_110_residues MVSELAAVILGIFVQFFEIVSAVLIVFGGLRAALEILLVEAFRKPYSYEHIRKKFTNKIFFGLELLIVADVLETLRKPSL EELFLVGAIVVIRSYLGYFLSKEAEEYQFD
Specific function: Unknown
COG id: COG4828
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12567; Mature: 12567
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSELAAVILGIFVQFFEIVSAVLIVFGGLRAALEILLVEAFRKPYSYEHIRKKFTNKIF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FGLELLIVADVLETLRKPSLEELFLVGAIVVIRSYLGYFLSKEAEEYQFD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC >Mature Secondary Structure MVSELAAVILGIFVQFFEIVSAVLIVFGGLRAALEILLVEAFRKPYSYEHIRKKFTNKIF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FGLELLIVADVLETLRKPSLEELFLVGAIVVIRSYLGYFLSKEAEEYQFD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA