Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226383

Identifier: 21226383

GI number: 21226383

Start: 378199

End: 378546

Strand: Direct

Name: 21226383

Synonym: MM_0281

Alternate gene names: NA

Gene position: 378199-378546 (Clockwise)

Preceding gene: 21226382

Following gene: 21226384

Centisome position: 9.23

GC content: 40.52

Gene sequence:

>348_bases
TTGAAGGGATACAGGATGGTTTCGGATCTGTTCAGGAATATTCTGCAGTTTTTTGAATGGGTTTTCGAGGCAATCGGGAC
GGTTATTATAATCTATGGGGGGCTAAGAGCGACATTTGAGCTCTTATTGTATGAAACTCTAAAAAAGCCCTGTTCTCTGG
AAGAGATAAGAAAAAAGCTTACAAACAAAATACTCTTCGGACTTGAGTTTTATATTGTCGTTGCCATTCTCGGGACCCTG
AGAGACCCTTCTTTATCCGAACTCGTTCTCCTGGGCATTGTCGTACTTATCAGGACAACTCTTGGCTATTTCCTGAGTAA
AGAGGTTAAAGAATACCAGTTTGATTAA

Upstream 100 bases:

>100_bases
TTGACTGAAACCCGCGGTCCGGTGAAATATAAGAAAATGCCTTATTGAAAGGATAAATGTCGTAATGTCGTATTGAAAGG
GTGAAAGGGTAAATGTCGTA

Downstream 100 bases:

>100_bases
GCGGAAATATCCGCGGAGACCTTAAAACCCGTATATTAATATCGAGGAGATCATACTGCTCCGAAAATTAAGGGACGTGC
TTCGTGCAGTGGAGCATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKGYRMVSDLFRNILQFFEWVFEAIGTVIIIYGGLRATFELLLYETLKKPCSLEEIRKKLTNKILFGLEFYIVVAILGTL
RDPSLSELVLLGIVVLIRTTLGYFLSKEVKEYQFD

Sequences:

>Translated_115_residues
MKGYRMVSDLFRNILQFFEWVFEAIGTVIIIYGGLRATFELLLYETLKKPCSLEEIRKKLTNKILFGLEFYIVVAILGTL
RDPSLSELVLLGIVVLIRTTLGYFLSKEVKEYQFD
>Mature_115_residues
MKGYRMVSDLFRNILQFFEWVFEAIGTVIIIYGGLRATFELLLYETLKKPCSLEEIRKKLTNKILFGLEFYIVVAILGTL
RDPSLSELVLLGIVVLIRTTLGYFLSKEVKEYQFD

Specific function: Unknown

COG id: COG4828

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13364; Mature: 13364

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGYRMVSDLFRNILQFFEWVFEAIGTVIIIYGGLRATFELLLYETLKKPCSLEEIRKKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHH
TNKILFGLEFYIVVAILGTLRDPSLSELVLLGIVVLIRTTLGYFLSKEVKEYQFD
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGYRMVSDLFRNILQFFEWVFEAIGTVIIIYGGLRATFELLLYETLKKPCSLEEIRKKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHH
TNKILFGLEFYIVVAILGTLRDPSLSELVLLGIVVLIRTTLGYFLSKEVKEYQFD
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA