| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226322
Identifier: 21226322
GI number: 21226322
Start: 299981
End: 300226
Strand: Reverse
Name: 21226322
Synonym: MM_0220
Alternate gene names: NA
Gene position: 300226-299981 (Counterclockwise)
Preceding gene: 21226323
Following gene: 21226320
Centisome position: 7.33
GC content: 38.62
Gene sequence:
>246_bases TTGAGCGATAGCACAGAAAATTTACATAGAGTGAAGATTGCTCTTCAGTTGAGTTTTATTTTGTGGGTCATGCTTGGAAT TTTAATTCTTTATGCTACTTTTGAAGAGCAGTCCAGACTGTTCGTGACATTCCTGCTCCTCTGTTCGGTTATTTTTTTCA CGCCCTTTCTTCCGGAAGGAACAGATTTACCTGAAGGAACAGGTTACAAAGAAATTGAAAACCTTGAAGGCTACAGGGAA GAATAA
Upstream 100 bases:
>100_bases CATTCTTAAATTTTGGAACTCGAATTTCGGAATTTTTCTAATAAATAGCTATTTATTCAATCCCAAATCATTCTAAATGG GATATTTTTGGGGGATTTGC
Downstream 100 bases:
>100_bases ATTGAAAAAATAAGTTGTCCCTGCAAACAGGGAGTCCATATTAAAGTTATTTAAATCCTGATTACTCAGGTCTTATCCTA TCTGATGATTTTCAAAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSDSTENLHRVKIALQLSFILWVMLGILILYATFEEQSRLFVTFLLLCSVIFFTPFLPEGTDLPEGTGYKEIENLEGYRE E
Sequences:
>Translated_81_residues MSDSTENLHRVKIALQLSFILWVMLGILILYATFEEQSRLFVTFLLLCSVIFFTPFLPEGTDLPEGTGYKEIENLEGYRE E >Mature_80_residues SDSTENLHRVKIALQLSFILWVMLGILILYATFEEQSRLFVTFLLLCSVIFFTPFLPEGTDLPEGTGYKEIENLEGYREE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9378; Mature: 9247
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSTENLHRVKIALQLSFILWVMLGILILYATFEEQSRLFVTFLLLCSVIFFTPFLPEG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TDLPEGTGYKEIENLEGYREE CCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure SDSTENLHRVKIALQLSFILWVMLGILILYATFEEQSRLFVTFLLLCSVIFFTPFLPEG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TDLPEGTGYKEIENLEGYREE CCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA