| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226319
Identifier: 21226319
GI number: 21226319
Start: 294833
End: 295441
Strand: Reverse
Name: 21226319
Synonym: MM_0217
Alternate gene names: NA
Gene position: 295441-294833 (Counterclockwise)
Preceding gene: 21226320
Following gene: 21226318
Centisome position: 7.21
GC content: 44.33
Gene sequence:
>609_bases ATGGCTGAGGATGTCCCTCCTCTCCCTATGACAGTAAATGGGGTTGCCTTTATTGATGGCTCTCCTGCTCCTGTAGATAC TGCTGTTGCAGCTTATCTTAACGGAGAGTACGTAGAACAATTTCTGATTAATAATCCCGCGGGAAATTTCACTTTCTATA TCTCAGGTAAAGCCGAAGATGAAGGAAAACCTGTTACTTTTACAATTGATGAAAAGGATACTGGCAAGAGTTTTACCTGG AAGTCAGGAACAGTAATTTCATCCGTTGAACTTTCTGTCGGCGATTCCGGGAATTCTAAAAAGAGTTCAACTTCAAACTC GGGTTCAGGATCACTGGCAGTGTCCGGGGATAAGGAAGAAGACAGGGAGATTATTGAAAATAGCGCAGTAACTCAACCGG ATGTCGAGGTTCCGGAAGTAACGGACGAGGAAAAAACTGTACAGGAAAGTGCAGATGATGAAGTAAAGGTCGAAAAGACT GAAGGATCCTCTGACGAGTCTTCTAAAAAAGGCAGTGCTCCGGGTTTCCAGATAATTTATGCAGTTGCAGGCATTATTCT GCTCACTTTCGGGTCAAAGCTCTGGAGGGACTCGAAAAGGAAGCCCTGA
Upstream 100 bases:
>100_bases TGCTAGCAATTGGAGGTAAATTATGAACAAAATATTGAAAAATAGTTTCTTAGGAACAGCTGTACTAATTTTATTTTTCT TAATAGCTGCCCATCCAGGT
Downstream 100 bases:
>100_bases AGGATTTTCCTTAATGGGTTTTTCGGATACGTAAAAACCTCAAGGTGATATGATGACCATCAAGGACAAACACTTAAGAA CTTTAGTGTGCCTGGTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MAEDVPPLPMTVNGVAFIDGSPAPVDTAVAAYLNGEYVEQFLINNPAGNFTFYISGKAEDEGKPVTFTIDEKDTGKSFTW KSGTVISSVELSVGDSGNSKKSSTSNSGSGSLAVSGDKEEDREIIENSAVTQPDVEVPEVTDEEKTVQESADDEVKVEKT EGSSDESSKKGSAPGFQIIYAVAGIILLTFGSKLWRDSKRKP
Sequences:
>Translated_202_residues MAEDVPPLPMTVNGVAFIDGSPAPVDTAVAAYLNGEYVEQFLINNPAGNFTFYISGKAEDEGKPVTFTIDEKDTGKSFTW KSGTVISSVELSVGDSGNSKKSSTSNSGSGSLAVSGDKEEDREIIENSAVTQPDVEVPEVTDEEKTVQESADDEVKVEKT EGSSDESSKKGSAPGFQIIYAVAGIILLTFGSKLWRDSKRKP >Mature_201_residues AEDVPPLPMTVNGVAFIDGSPAPVDTAVAAYLNGEYVEQFLINNPAGNFTFYISGKAEDEGKPVTFTIDEKDTGKSFTWK SGTVISSVELSVGDSGNSKKSSTSNSGSGSLAVSGDKEEDREIIENSAVTQPDVEVPEVTDEEKTVQESADDEVKVEKTE GSSDESSKKGSAPGFQIIYAVAGIILLTFGSKLWRDSKRKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21453; Mature: 21321
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEDVPPLPMTVNGVAFIDGSPAPVDTAVAAYLNGEYVEQFLINNPAGNFTFYISGKAED CCCCCCCCCEEECCEEEECCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEECCCCC EGKPVTFTIDEKDTGKSFTWKSGTVISSVELSVGDSGNSKKSSTSNSGSGSLAVSGDKEE CCCCEEEEECCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCHH DREIIENSAVTQPDVEVPEVTDEEKTVQESADDEVKVEKTEGSSDESSKKGSAPGFQIIY HHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH AVAGIILLTFGSKLWRDSKRKP HHHHHHHHHHCHHHHHCCCCCC >Mature Secondary Structure AEDVPPLPMTVNGVAFIDGSPAPVDTAVAAYLNGEYVEQFLINNPAGNFTFYISGKAED CCCCCCCCEEECCEEEECCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEECCCCC EGKPVTFTIDEKDTGKSFTWKSGTVISSVELSVGDSGNSKKSSTSNSGSGSLAVSGDKEE CCCCEEEEECCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCHH DREIIENSAVTQPDVEVPEVTDEEKTVQESADDEVKVEKTEGSSDESSKKGSAPGFQIIY HHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH AVAGIILLTFGSKLWRDSKRKP HHHHHHHHHHCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA