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The map label for this gene is recJ

Identifier: 21226315

GI number: 21226315

Start: 288722

End: 290059

Strand: Reverse

Name: recJ

Synonym: MM_0213

Alternate gene names: NA

Gene position: 290059-288722 (Counterclockwise)

Preceding gene: 21226316

Following gene: 21226314

Centisome position: 7.08

GC content: 48.13

Gene sequence:

>1338_bases
TTGAGTGAGCTTGAAAAACTGATAAATCTTGCAAAAAATGCAGCCGATAAAATACGCAGGCATAAATTTGTGCGCGTGAT
TTCACATAACGATGCTGACGGGCTAACTTCAGCCGGAATAATGGCCCACGCCCTTTTGAGGGCTGGCATCCCTTTTCAGC
TTTCAATAGCCAGCAAGCTGGACGGGGCTGTAATTGAAGAAGTGAACAGGAGCATCTCTTCAGGAGAACTTGTCATTTTC
TGTGATATGGGCAGCGGGCATCCAGAACTTATTAAACAAGTGGGCGCGGATGTTGTTATAATTGACCACCACCAGCCAGT
AGGGCAGTCCCCCGCAAAAGCTGTGGTAAACGCACATATGGTAGGAATAGACGGGGCAACGGATATCTCGGCTTCAGGAA
CCTGTTATCTTGTAGCTCGGGAACTCGGGACAGGAAACATCGACCTTGCAGGGCTCGCAATTGCAGGGGCAGTTGGAGAC
AGGCAGCTTTTCCGGACTGCAAATGCTTTCATCCTGGAAGAAGCCTTAAAATCAGGGGTTGTTTCCATCAGAAAAGGGTT
AAAAGTCGGGGATGGAAATCTTGCAGACGTGCTCGCATACAGCAAAGAGCCTTTTCTAGATGTAACCGGTTACCCGGAAA
AAGCGGCGGAATTCTTAAATCAGCTTGGGCTTTCCGGAAACATTGAAGATCTTTCCGAAGAAGAGACCTCAAAACTTGCC
AGTGCTGTTGCCCTGAAACTTGTCAAACAGGCAAGCCCTGAAGCAATTGAAGCGGTTATCGGGGAAGTTTTCCTGCTCAA
CCGGGAACTTGTCCACAATGTTTATGATTTCATTTCCATACTCAATACCTGCGGGAAGCAAAAGGTTTACGGGCTTGCCC
TCGCTCTCTGCCTGAAAGACGCAACTATCCTTGATGAAGCCTTTTCCCTTACAAAGGATCATGAAAAGAATCTTGCCATC
GATATCCGGAAAAATGTGGAAAATATTCGCAAAGGGGAAAACCTCTGGTATATCAGCACGGTTGAAGCCATCTCGACAGG
GGACCTTGCAACAACCGTAGTCAGATACCTCCATCCCGAGCTTCCTTTTATCTGTGTAAACGAATCTGAAGGTATTTTAA
AGGTTTCTGCCCGAGGTACTCGTGAACTCGTTTCAAAAGGGCTTGACCTTGCCTTTACCCTCAGGGAAGCTGCTGGTGCT
GCAGGCGGAAACGGAGGAGGGCACAGTGTTGCATCCGGAGCTTCAATACCCTTGGGAAGTACGGAGGAGTTCCTGAGCAT
TGCAGACCGTATAATCGGGGAGCAGCTCAGGAAAAACGCCAGTGGGAAAGTAAAATGA

Upstream 100 bases:

>100_bases
TTCCGGAAGCTGGCAGCTAAATTTTTAACTGATCCCTGTAATATACTGATTTCTGTACCTGTCTTCTTACTTTGATATTG
AATTTTACGAGTGATGAGCT

Downstream 100 bases:

>100_bases
TAATTTCAATGGGAAAGAAGAGCAAGTAAACGTGATAAGCATAAATAATGAACAAAAACTGATCCTGAAAACCAGCCGGC
AGAAATTGAATGGTAAAAAC

Product: putative single-stranded-DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MSELEKLINLAKNAADKIRRHKFVRVISHNDADGLTSAGIMAHALLRAGIPFQLSIASKLDGAVIEEVNRSISSGELVIF
CDMGSGHPELIKQVGADVVIIDHHQPVGQSPAKAVVNAHMVGIDGATDISASGTCYLVARELGTGNIDLAGLAIAGAVGD
RQLFRTANAFILEEALKSGVVSIRKGLKVGDGNLADVLAYSKEPFLDVTGYPEKAAEFLNQLGLSGNIEDLSEEETSKLA
SAVALKLVKQASPEAIEAVIGEVFLLNRELVHNVYDFISILNTCGKQKVYGLALALCLKDATILDEAFSLTKDHEKNLAI
DIRKNVENIRKGENLWYISTVEAISTGDLATTVVRYLHPELPFICVNESEGILKVSARGTRELVSKGLDLAFTLREAAGA
AGGNGGGHSVASGASIPLGSTEEFLSIADRIIGEQLRKNASGKVK

Sequences:

>Translated_445_residues
MSELEKLINLAKNAADKIRRHKFVRVISHNDADGLTSAGIMAHALLRAGIPFQLSIASKLDGAVIEEVNRSISSGELVIF
CDMGSGHPELIKQVGADVVIIDHHQPVGQSPAKAVVNAHMVGIDGATDISASGTCYLVARELGTGNIDLAGLAIAGAVGD
RQLFRTANAFILEEALKSGVVSIRKGLKVGDGNLADVLAYSKEPFLDVTGYPEKAAEFLNQLGLSGNIEDLSEEETSKLA
SAVALKLVKQASPEAIEAVIGEVFLLNRELVHNVYDFISILNTCGKQKVYGLALALCLKDATILDEAFSLTKDHEKNLAI
DIRKNVENIRKGENLWYISTVEAISTGDLATTVVRYLHPELPFICVNESEGILKVSARGTRELVSKGLDLAFTLREAAGA
AGGNGGGHSVASGASIPLGSTEEFLSIADRIIGEQLRKNASGKVK
>Mature_444_residues
SELEKLINLAKNAADKIRRHKFVRVISHNDADGLTSAGIMAHALLRAGIPFQLSIASKLDGAVIEEVNRSISSGELVIFC
DMGSGHPELIKQVGADVVIIDHHQPVGQSPAKAVVNAHMVGIDGATDISASGTCYLVARELGTGNIDLAGLAIAGAVGDR
QLFRTANAFILEEALKSGVVSIRKGLKVGDGNLADVLAYSKEPFLDVTGYPEKAAEFLNQLGLSGNIEDLSEEETSKLAS
AVALKLVKQASPEAIEAVIGEVFLLNRELVHNVYDFISILNTCGKQKVYGLALALCLKDATILDEAFSLTKDHEKNLAID
IRKNVENIRKGENLWYISTVEAISTGDLATTVVRYLHPELPFICVNESEGILKVSARGTRELVSKGLDLAFTLREAAGAA
GGNGGGHSVASGASIPLGSTEEFLSIADRIIGEQLRKNASGKVK

Specific function: Unknown

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0977 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 47211; Mature: 47079

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELEKLINLAKNAADKIRRHKFVRVISHNDADGLTSAGIMAHALLRAGIPFQLSIASKL
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHC
DGAVIEEVNRSISSGELVIFCDMGSGHPELIKQVGADVVIIDHHQPVGQSPAKAVVNAHM
CHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHEE
VGIDGATDISASGTCYLVARELGTGNIDLAGLAIAGAVGDRQLFRTANAFILEEALKSGV
EECCCCCCCCCCCEEEEEEEECCCCCCEEEHHHEECCCCHHHHHHHHHHHHHHHHHHHHH
VSIRKGLKVGDGNLADVLAYSKEPFLDVTGYPEKAAEFLNQLGLSGNIEDLSEEETSKLA
HHHHHCCCCCCCCHHHHHHHCCCCCEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SAVALKLVKQASPEAIEAVIGEVFLLNRELVHNVYDFISILNTCGKQKVYGLALALCLKD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ATILDEAFSLTKDHEKNLAIDIRKNVENIRKGENLWYISTVEAISTGDLATTVVRYLHPE
HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCEEEEEEEHHHCCCHHHHHHHHHHCCC
LPFICVNESEGILKVSARGTRELVSKGLDLAFTLREAAGAAGGNGGGHSVASGASIPLGS
CCEEEECCCCCEEEEECCCHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCC
TEEFLSIADRIIGEQLRKNASGKVK
HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SELEKLINLAKNAADKIRRHKFVRVISHNDADGLTSAGIMAHALLRAGIPFQLSIASKL
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHC
DGAVIEEVNRSISSGELVIFCDMGSGHPELIKQVGADVVIIDHHQPVGQSPAKAVVNAHM
CHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHEE
VGIDGATDISASGTCYLVARELGTGNIDLAGLAIAGAVGDRQLFRTANAFILEEALKSGV
EECCCCCCCCCCCEEEEEEEECCCCCCEEEHHHEECCCCHHHHHHHHHHHHHHHHHHHHH
VSIRKGLKVGDGNLADVLAYSKEPFLDVTGYPEKAAEFLNQLGLSGNIEDLSEEETSKLA
HHHHHCCCCCCCCHHHHHHHCCCCCEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SAVALKLVKQASPEAIEAVIGEVFLLNRELVHNVYDFISILNTCGKQKVYGLALALCLKD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ATILDEAFSLTKDHEKNLAIDIRKNVENIRKGENLWYISTVEAISTGDLATTVVRYLHPE
HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCEEEEEEEHHHCCCHHHHHHHHHHCCC
LPFICVNESEGILKVSARGTRELVSKGLDLAFTLREAAGAAGGNGGGHSVASGASIPLGS
CCEEEECCCCCEEEEECCCHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCC
TEEFLSIADRIIGEQLRKNASGKVK
HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]