| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226310
Identifier: 21226310
GI number: 21226310
Start: 283525
End: 283896
Strand: Reverse
Name: 21226310
Synonym: MM_0208
Alternate gene names: NA
Gene position: 283896-283525 (Counterclockwise)
Preceding gene: 21226311
Following gene: 21226309
Centisome position: 6.93
GC content: 44.89
Gene sequence:
>372_bases ATGGGGAAGGCTACGGAAGAAAAGGTAAAAATAAAGATTATTGAGACTGCAGGAATTAACTGCTGTGTTGCAGCCTGCGA CGGGCAGAAAGTGCACGATAAAATTGCAGATGCTTTCCGCAAAAACAGGATTGTTGAGCTTTCTTTTGCAGAAACCAATG AACTTACTCCTGCCTTCTTAAATTCGGCTGTGGGGCAGCTTTATGGGACCTTCCAGGCTGAGATCATTGAAAAAAGCCTT TCTTTTACTGACCTTGACCACGAAGATGAGATCGTCCTTAAGAGGGTAATGGAGCGGGCAAAAGTCTATTTTGAACATGC ATATTCCTGCAGGAAAGCACTCAGGGATGTGATCGGGGGCGAAGATGCCTAA
Upstream 100 bases:
>100_bases TCCAAAATACAGAAGGATAACAGGCAAGAGAAGAGGGGCTTCGTCGGCTGTTTTTCGGCTCAAAACTCTGGCTCTTGATC TCTGGCAAAGGAGTGATCAG
Downstream 100 bases:
>100_bases GAGTGTCCACCGCGCAACGGTCTATCCTGTAAGGCGCAGTGCGAGGCTCCGCCCCGGTAAAACCCTGCCTGTAAAACCAG GTCCTGCTCCTATCCATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MGKATEEKVKIKIIETAGINCCVAACDGQKVHDKIADAFRKNRIVELSFAETNELTPAFLNSAVGQLYGTFQAEIIEKSL SFTDLDHEDEIVLKRVMERAKVYFEHAYSCRKALRDVIGGEDA
Sequences:
>Translated_123_residues MGKATEEKVKIKIIETAGINCCVAACDGQKVHDKIADAFRKNRIVELSFAETNELTPAFLNSAVGQLYGTFQAEIIEKSL SFTDLDHEDEIVLKRVMERAKVYFEHAYSCRKALRDVIGGEDA >Mature_122_residues GKATEEKVKIKIIETAGINCCVAACDGQKVHDKIADAFRKNRIVELSFAETNELTPAFLNSAVGQLYGTFQAEIIEKSLS FTDLDHEDEIVLKRVMERAKVYFEHAYSCRKALRDVIGGEDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13727; Mature: 13596
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKATEEKVKIKIIETAGINCCVAACDGQKVHDKIADAFRKNRIVELSFAETNELTPAFL CCCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHH NSAVGQLYGTFQAEIIEKSLSFTDLDHEDEIVLKRVMERAKVYFEHAYSCRKALRDVIGG HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EDA CCC >Mature Secondary Structure GKATEEKVKIKIIETAGINCCVAACDGQKVHDKIADAFRKNRIVELSFAETNELTPAFL CCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHH NSAVGQLYGTFQAEIIEKSLSFTDLDHEDEIVLKRVMERAKVYFEHAYSCRKALRDVIGG HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EDA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA