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The map label for this gene is 21226311

Identifier: 21226311

GI number: 21226311

Start: 284316

End: 284774

Strand: Reverse

Name: 21226311

Synonym: MM_0209

Alternate gene names: NA

Gene position: 284774-284316 (Counterclockwise)

Preceding gene: 21226312

Following gene: 21226310

Centisome position: 6.95

GC content: 45.32

Gene sequence:

>459_bases
ATGCTTGAAGAATATGAGAAGAAAAGGGATTTTAATAAGACCTCCGAACCCCCTGCCAGAGGGGAAGAGAAGAATTCCGA
TAAGCCTGTTTTTGTGGTTCAGCGCCATGATGCGACCAATCTCCATTATGATTTTCGCCTGGAAATGGACGGAGTCCTTA
AGAGCTGGGCAGTTCCTAAAGAGCCTCCGAAAAGCCCGGGAACCAGGAGGCTCGCTATCGAGACTGAAGACCATCCACTC
GGATATGCAGACTTTGAAGGGGAAATTCCAGAAGGACAGTACGGAGCCGGCAGAGTTGAGATCTGGGACAGGGGTACTTT
TGAACTTCTAAAACGCAACGAGAAAGAGATTATTATAACGCTTCACGGGGAAGAACTTGAAGGAGATTACGTACTGATAA
AAACAAAGTACGGAAAAGAGGATAAAGGGTGGCTATTTTTTAAGAAAAAAACCGGTTAA

Upstream 100 bases:

>100_bases
CCGCTCCGGAGGGGCTGGATTCCGAAATTTACTGTCTTTTTTCAAGCTTTGCCGCATAACCATTTATATCCTGCGCTGCC
ATATTTTCTATTGATCTCCC

Downstream 100 bases:

>100_bases
GCCATTGAATAGCTTATTCCAAGGCGTGAAGTCCCTTCCTCGCCTTCATCAAAACTCAGGGAGGAGAAGTTCACGCATTT
AATAATTTAAACGATTGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MLEEYEKKRDFNKTSEPPARGEEKNSDKPVFVVQRHDATNLHYDFRLEMDGVLKSWAVPKEPPKSPGTRRLAIETEDHPL
GYADFEGEIPEGQYGAGRVEIWDRGTFELLKRNEKEIIITLHGEELEGDYVLIKTKYGKEDKGWLFFKKKTG

Sequences:

>Translated_152_residues
MLEEYEKKRDFNKTSEPPARGEEKNSDKPVFVVQRHDATNLHYDFRLEMDGVLKSWAVPKEPPKSPGTRRLAIETEDHPL
GYADFEGEIPEGQYGAGRVEIWDRGTFELLKRNEKEIIITLHGEELEGDYVLIKTKYGKEDKGWLFFKKKTG
>Mature_152_residues
MLEEYEKKRDFNKTSEPPARGEEKNSDKPVFVVQRHDATNLHYDFRLEMDGVLKSWAVPKEPPKSPGTRRLAIETEDHPL
GYADFEGEIPEGQYGAGRVEIWDRGTFELLKRNEKEIIITLHGEELEGDYVLIKTKYGKEDKGWLFFKKKTG

Specific function: Unknown

COG id: COG1793

COG function: function code L; ATP-dependent DNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent DNA ligase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012309
- InterPro:   IPR012310
- InterPro:   IPR014146
- InterPro:   IPR002755
- InterPro:   IPR014144
- InterPro:   IPR014145
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF04679 DNA_ligase_A_C; PF01068 DNA_ligase_A_M; PF01896 DNA_primase_S [H]

EC number: NA

Molecular weight: Translated: 17657; Mature: 17657

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEEYEKKRDFNKTSEPPARGEEKNSDKPVFVVQRHDATNLHYDFRLEMDGVLKSWAVPK
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCHHHHCCCCC
EPPKSPGTRRLAIETEDHPLGYADFEGEIPEGQYGAGRVEIWDRGTFELLKRNEKEIIIT
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCEEEEE
LHGEELEGDYVLIKTKYGKEDKGWLFFKKKTG
ECCCCCCCCEEEEEECCCCCCCCEEEEEECCC
>Mature Secondary Structure
MLEEYEKKRDFNKTSEPPARGEEKNSDKPVFVVQRHDATNLHYDFRLEMDGVLKSWAVPK
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCHHHHCCCCC
EPPKSPGTRRLAIETEDHPLGYADFEGEIPEGQYGAGRVEIWDRGTFELLKRNEKEIIIT
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCEEEEE
LHGEELEGDYVLIKTKYGKEDKGWLFFKKKTG
ECCCCCCCCEEEEEECCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]