Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226298
Identifier: 21226298
GI number: 21226298
Start: 272451
End: 273323
Strand: Direct
Name: 21226298
Synonym: MM_0196
Alternate gene names: NA
Gene position: 272451-273323 (Clockwise)
Preceding gene: 21226297
Following gene: 21226299
Centisome position: 6.65
GC content: 29.67
Gene sequence:
>873_bases TTGATTCCCCCAACAAATTATAAAGTTTATTTTGAGGGGAATGATAACCTAAACAAATTAGTGCAAGAAGATGGAAAAAT AAATCCAAAGAATGGAATTACTCTTAAAGAGGCAACTAGTTGGTTTACTACCATCTGGGAACAATCTAATTCTGAATTTT TTGAAGATTATAAAAAAAAGAAAGGGCATGATTGGATAGACGAAGATTTAAAAGCATTACTAATATTTTTAACTAAGAAA AAAAATCCAACTGGCAGACAAAATATCAGTGGTTACCTTAAGCTAAGAAAAATGAAAGATCTACATACTGCCACTAACGA AAAACCATTTGAAGAAGAAATAATAGAAGCATTGGCTCAAGGTAAAATAATAATAATTGACTTATCTCAAGGAGATCCGG AAATTCAAAAGCTATACTCTGAGAGAATATGTAGTAAAATATTCAACCACTCAATGGGTAATTTCACCAGAAATAAACCA AATAATTTTGTACAATTTTACTTTGAAGAAGCTCACAATCTCTTTCCAAAGAAAGAAGATAAAGATATGAGTGATATATA TAACCGAATAGCAAAAGAAGGAGCAAAGTTAAATTTAGGTTTAATCTATGCAACTCAAGAAGTAAGCTCAATATCTTCAA ATATATTAAAAAATACCCAGAATTGGTTTATTGCTCATTTAAACAATGAAGATGAGATAAAAGAAATTAAAAAATACTAT GATTTTAAAGATTTTACCGAAAATTTAATTCTATTCAACGCTACCTCAGACAAGGGATTCATCAGAATGAAGACTTATTC GAATTCCTTTGTGGTACCAGTCCACATCGATCGATTTTTGGCTGATGAAATTGATTTAGAGGAATTAAGATGA
Upstream 100 bases:
>100_bases TATACTACCAGCTTCTAGAGAAAACGAACATGATTACTCAGATAAAATCAGATATGGGAGGAAGAAAGCAGCATACTTAT GTTGCTTATTCAGTGCAGGA
Downstream 100 bases:
>100_bases GTTATTCAAGTCAAGCTGGAAGGAGACCAAATGAATATGCGAGTAAATCGTCACATACTAACATAATATGGGACCAAGAT ATTAAAGAATTCTTAGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MIPPTNYKVYFEGNDNLNKLVQEDGKINPKNGITLKEATSWFTTIWEQSNSEFFEDYKKKKGHDWIDEDLKALLIFLTKK KNPTGRQNISGYLKLRKMKDLHTATNEKPFEEEIIEALAQGKIIIIDLSQGDPEIQKLYSERICSKIFNHSMGNFTRNKP NNFVQFYFEEAHNLFPKKEDKDMSDIYNRIAKEGAKLNLGLIYATQEVSSISSNILKNTQNWFIAHLNNEDEIKEIKKYY DFKDFTENLILFNATSDKGFIRMKTYSNSFVVPVHIDRFLADEIDLEELR
Sequences:
>Translated_290_residues MIPPTNYKVYFEGNDNLNKLVQEDGKINPKNGITLKEATSWFTTIWEQSNSEFFEDYKKKKGHDWIDEDLKALLIFLTKK KNPTGRQNISGYLKLRKMKDLHTATNEKPFEEEIIEALAQGKIIIIDLSQGDPEIQKLYSERICSKIFNHSMGNFTRNKP NNFVQFYFEEAHNLFPKKEDKDMSDIYNRIAKEGAKLNLGLIYATQEVSSISSNILKNTQNWFIAHLNNEDEIKEIKKYY DFKDFTENLILFNATSDKGFIRMKTYSNSFVVPVHIDRFLADEIDLEELR >Mature_290_residues MIPPTNYKVYFEGNDNLNKLVQEDGKINPKNGITLKEATSWFTTIWEQSNSEFFEDYKKKKGHDWIDEDLKALLIFLTKK KNPTGRQNISGYLKLRKMKDLHTATNEKPFEEEIIEALAQGKIIIIDLSQGDPEIQKLYSERICSKIFNHSMGNFTRNKP NNFVQFYFEEAHNLFPKKEDKDMSDIYNRIAKEGAKLNLGLIYATQEVSSISSNILKNTQNWFIAHLNNEDEIKEIKKYY DFKDFTENLILFNATSDKGFIRMKTYSNSFVVPVHIDRFLADEIDLEELR
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33979; Mature: 33979
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPPTNYKVYFEGNDNLNKLVQEDGKINPKNGITLKEATSWFTTIWEQSNSEFFEDYKKK CCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH KGHDWIDEDLKALLIFLTKKKNPTGRQNISGYLKLRKMKDLHTATNEKPFEEEIIEALAQ CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC GKIIIIDLSQGDPEIQKLYSERICSKIFNHSMGNFTRNKPNNFVQFYFEEAHNLFPKKED CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC KDMSDIYNRIAKEGAKLNLGLIYATQEVSSISSNILKNTQNWFIAHLNNEDEIKEIKKYY CCHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH DFKDFTENLILFNATSDKGFIRMKTYSNSFVVPVHIDRFLADEIDLEELR CHHHHCCCEEEEEECCCCCEEEEEECCCCEEEEEEHHHHHHHCCCHHHCC >Mature Secondary Structure MIPPTNYKVYFEGNDNLNKLVQEDGKINPKNGITLKEATSWFTTIWEQSNSEFFEDYKKK CCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH KGHDWIDEDLKALLIFLTKKKNPTGRQNISGYLKLRKMKDLHTATNEKPFEEEIIEALAQ CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC GKIIIIDLSQGDPEIQKLYSERICSKIFNHSMGNFTRNKPNNFVQFYFEEAHNLFPKKED CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC KDMSDIYNRIAKEGAKLNLGLIYATQEVSSISSNILKNTQNWFIAHLNNEDEIKEIKKYY CCHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH DFKDFTENLILFNATSDKGFIRMKTYSNSFVVPVHIDRFLADEIDLEELR CHHHHCCCEEEEEECCCCCEEEEEECCCCEEEEEEHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA