Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226299
Identifier: 21226299
GI number: 21226299
Start: 273320
End: 274666
Strand: Direct
Name: 21226299
Synonym: MM_0197
Alternate gene names: NA
Gene position: 273320-274666 (Clockwise)
Preceding gene: 21226298
Following gene: 21226302
Centisome position: 6.67
GC content: 32.44
Gene sequence:
>1347_bases ATGAGTTATTCAAGTCAAGCTGGAAGGAGACCAAATGAATATGCGAGTAAATCGTCACATACTAACATAATATGGGACCA AGATATTAAAGAATTCTTAGATAAATGCAGTCTTCCCAGCGGCTCTGATGAGATTGTTCTAAGAGAAGAAAATCTTATAG CTGATGTCAATTATGATTTAAAAAGCCCTATAAGCCTTTTTATCACAATAGATGGAGGGTATACAGAGGTTTTCATTAGA AGAGAGTTTCCATCATGTGTTTTGAACTTTTTTCAATTTGGAGCATTGATTTTTGAGCTTAAGGATCTTAAAACTCTTTC TAACAAACCGTTTATAGATCCCGAAGATATCGAAAGGCTCAAAAAAATAGAACGGCTAAAATTTGTTCTTCCCACAAAAA ACATTTCTTACAAAGATGAAAGTTTAACCAATTCAGTTAGAAATACATTTTATGAGTTTTTTACAGAAAATAAAGAAAAT TTCATTGAAACTCTAAAATGGTTTTTATATAGGGAATACGACAGTAAAAAGGAAATCGCTTCTTACACACTCTCTAGTTG TCCAAATCCAAAATGTAACAATAAAAGAATTGAATTAAACAAAAGGGATATGTCAGAGAATTATCTTTTCTGTTGCGATG ACTGTGGCGAAAAAATATATTTAACAGATGTTTTTAGGCTTCACGAAGTAATTGATGATGAATTTGGGGCAGGTGGGATT TTAGCATATGTTACCAATCTTCTTGAACATATATTGTTGATTCATTATATTAGAACAATATTGAGGATAAAGCCCTCTCT GCTGAAAGAAACATTATTTATCAAAGAGGGGCCTTTAGCATTTTTTAGTGTCACCGCGAATATGCATAAACCAATGAGAG ATTTGTCTAACTATTTATTGGAAAAATATGATCTTAATTTAGTAGGTGTTGAAAAAAGTGGATCTTTTGTAGAACACGCC GCTCAAATAGGAAATAAGATGGAATCTGGGACACTTTTGCTCATAAACAACAACTACATATATAAGTATATCATTCCCGG CAAAGCTGATCCAGATAATCCCTATGCAAGGACATCTTATTATGGGGGAAAATTGATTTTCAAATCCCGTGACGAAAGAT TATACGTTGTAACTATACCTGTTGAAAACGAATCTGTCGTTCTTGATCCAAAAAAAGAAAATTTTAAGAATCTAGACTCA ATTCTGCAGAATCTAGAACAATTAAAATGTGATATGTATGATAATTCTTTGTTCCCTGTTGCGCTCGCAAATAAACTAGT ATCCTTATCAGCGCATCCAAGTTCGGTAATACTTGAAAAATTTGCTAAAAGCTTCATAAAACCATAA
Upstream 100 bases:
>100_bases ACAAGGGATTCATCAGAATGAAGACTTATTCGAATTCCTTTGTGGTACCAGTCCACATCGATCGATTTTTGGCTGATGAA ATTGATTTAGAGGAATTAAG
Downstream 100 bases:
>100_bases GACCAAAAGACTATGCTGAAAAATAAGTAGTAACAGTGAGTCATTGCCCATATAGAAAAACGAGTGCATCAATCTTTTTT AGAAAAACAAAAAGAGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSYSSQAGRRPNEYASKSSHTNIIWDQDIKEFLDKCSLPSGSDEIVLREENLIADVNYDLKSPISLFITIDGGYTEVFIR REFPSCVLNFFQFGALIFELKDLKTLSNKPFIDPEDIERLKKIERLKFVLPTKNISYKDESLTNSVRNTFYEFFTENKEN FIETLKWFLYREYDSKKEIASYTLSSCPNPKCNNKRIELNKRDMSENYLFCCDDCGEKIYLTDVFRLHEVIDDEFGAGGI LAYVTNLLEHILLIHYIRTILRIKPSLLKETLFIKEGPLAFFSVTANMHKPMRDLSNYLLEKYDLNLVGVEKSGSFVEHA AQIGNKMESGTLLLINNNYIYKYIIPGKADPDNPYARTSYYGGKLIFKSRDERLYVVTIPVENESVVLDPKKENFKNLDS ILQNLEQLKCDMYDNSLFPVALANKLVSLSAHPSSVILEKFAKSFIKP
Sequences:
>Translated_448_residues MSYSSQAGRRPNEYASKSSHTNIIWDQDIKEFLDKCSLPSGSDEIVLREENLIADVNYDLKSPISLFITIDGGYTEVFIR REFPSCVLNFFQFGALIFELKDLKTLSNKPFIDPEDIERLKKIERLKFVLPTKNISYKDESLTNSVRNTFYEFFTENKEN FIETLKWFLYREYDSKKEIASYTLSSCPNPKCNNKRIELNKRDMSENYLFCCDDCGEKIYLTDVFRLHEVIDDEFGAGGI LAYVTNLLEHILLIHYIRTILRIKPSLLKETLFIKEGPLAFFSVTANMHKPMRDLSNYLLEKYDLNLVGVEKSGSFVEHA AQIGNKMESGTLLLINNNYIYKYIIPGKADPDNPYARTSYYGGKLIFKSRDERLYVVTIPVENESVVLDPKKENFKNLDS ILQNLEQLKCDMYDNSLFPVALANKLVSLSAHPSSVILEKFAKSFIKP >Mature_447_residues SYSSQAGRRPNEYASKSSHTNIIWDQDIKEFLDKCSLPSGSDEIVLREENLIADVNYDLKSPISLFITIDGGYTEVFIRR EFPSCVLNFFQFGALIFELKDLKTLSNKPFIDPEDIERLKKIERLKFVLPTKNISYKDESLTNSVRNTFYEFFTENKENF IETLKWFLYREYDSKKEIASYTLSSCPNPKCNNKRIELNKRDMSENYLFCCDDCGEKIYLTDVFRLHEVIDDEFGAGGIL AYVTNLLEHILLIHYIRTILRIKPSLLKETLFIKEGPLAFFSVTANMHKPMRDLSNYLLEKYDLNLVGVEKSGSFVEHAA QIGNKMESGTLLLINNNYIYKYIIPGKADPDNPYARTSYYGGKLIFKSRDERLYVVTIPVENESVVLDPKKENFKNLDSI LQNLEQLKCDMYDNSLFPVALANKLVSLSAHPSSVILEKFAKSFIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51764; Mature: 51633
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSSQAGRRPNEYASKSSHTNIIWDQDIKEFLDKCSLPSGSDEIVLREENLIADVNYDL CCCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEECCCEEEECCCCC KSPISLFITIDGGYTEVFIRREFPSCVLNFFQFGALIFELKDLKTLSNKPFIDPEDIERL CCCEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH KKIERLKFVLPTKNISYKDESLTNSVRNTFYEFFTENKENFIETLKWFLYREYDSKKEIA HHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHH SYTLSSCPNPKCNNKRIELNKRDMSENYLFCCDDCGEKIYLTDVFRLHEVIDDEFGAGGI HHHHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHCCCCCCHH LAYVTNLLEHILLIHYIRTILRIKPSLLKETLFIKEGPLAFFSVTANMHKPMRDLSNYLL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEECCCEEEEEEECHHHHHHHHHHHHHH EKYDLNLVGVEKSGSFVEHAAQIGNKMESGTLLLINNNYIYKYIIPGKADPDNPYARTSY HHHCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCEE YGGKLIFKSRDERLYVVTIPVENESVVLDPKKENFKNLDSILQNLEQLKCDMYDNSLFPV CCCEEEEECCCCEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ALANKLVSLSAHPSSVILEKFAKSFIKP HHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SYSSQAGRRPNEYASKSSHTNIIWDQDIKEFLDKCSLPSGSDEIVLREENLIADVNYDL CCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEECCCEEEECCCCC KSPISLFITIDGGYTEVFIRREFPSCVLNFFQFGALIFELKDLKTLSNKPFIDPEDIERL CCCEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH KKIERLKFVLPTKNISYKDESLTNSVRNTFYEFFTENKENFIETLKWFLYREYDSKKEIA HHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHH SYTLSSCPNPKCNNKRIELNKRDMSENYLFCCDDCGEKIYLTDVFRLHEVIDDEFGAGGI HHHHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHCCCCCCHH LAYVTNLLEHILLIHYIRTILRIKPSLLKETLFIKEGPLAFFSVTANMHKPMRDLSNYLL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEECCCEEEEEEECHHHHHHHHHHHHHH EKYDLNLVGVEKSGSFVEHAAQIGNKMESGTLLLINNNYIYKYIIPGKADPDNPYARTSY HHHCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCEE YGGKLIFKSRDERLYVVTIPVENESVVLDPKKENFKNLDSILQNLEQLKCDMYDNSLFPV CCCEEEEECCCCEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ALANKLVSLSAHPSSVILEKFAKSFIKP HHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA