Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226299

Identifier: 21226299

GI number: 21226299

Start: 273320

End: 274666

Strand: Direct

Name: 21226299

Synonym: MM_0197

Alternate gene names: NA

Gene position: 273320-274666 (Clockwise)

Preceding gene: 21226298

Following gene: 21226302

Centisome position: 6.67

GC content: 32.44

Gene sequence:

>1347_bases
ATGAGTTATTCAAGTCAAGCTGGAAGGAGACCAAATGAATATGCGAGTAAATCGTCACATACTAACATAATATGGGACCA
AGATATTAAAGAATTCTTAGATAAATGCAGTCTTCCCAGCGGCTCTGATGAGATTGTTCTAAGAGAAGAAAATCTTATAG
CTGATGTCAATTATGATTTAAAAAGCCCTATAAGCCTTTTTATCACAATAGATGGAGGGTATACAGAGGTTTTCATTAGA
AGAGAGTTTCCATCATGTGTTTTGAACTTTTTTCAATTTGGAGCATTGATTTTTGAGCTTAAGGATCTTAAAACTCTTTC
TAACAAACCGTTTATAGATCCCGAAGATATCGAAAGGCTCAAAAAAATAGAACGGCTAAAATTTGTTCTTCCCACAAAAA
ACATTTCTTACAAAGATGAAAGTTTAACCAATTCAGTTAGAAATACATTTTATGAGTTTTTTACAGAAAATAAAGAAAAT
TTCATTGAAACTCTAAAATGGTTTTTATATAGGGAATACGACAGTAAAAAGGAAATCGCTTCTTACACACTCTCTAGTTG
TCCAAATCCAAAATGTAACAATAAAAGAATTGAATTAAACAAAAGGGATATGTCAGAGAATTATCTTTTCTGTTGCGATG
ACTGTGGCGAAAAAATATATTTAACAGATGTTTTTAGGCTTCACGAAGTAATTGATGATGAATTTGGGGCAGGTGGGATT
TTAGCATATGTTACCAATCTTCTTGAACATATATTGTTGATTCATTATATTAGAACAATATTGAGGATAAAGCCCTCTCT
GCTGAAAGAAACATTATTTATCAAAGAGGGGCCTTTAGCATTTTTTAGTGTCACCGCGAATATGCATAAACCAATGAGAG
ATTTGTCTAACTATTTATTGGAAAAATATGATCTTAATTTAGTAGGTGTTGAAAAAAGTGGATCTTTTGTAGAACACGCC
GCTCAAATAGGAAATAAGATGGAATCTGGGACACTTTTGCTCATAAACAACAACTACATATATAAGTATATCATTCCCGG
CAAAGCTGATCCAGATAATCCCTATGCAAGGACATCTTATTATGGGGGAAAATTGATTTTCAAATCCCGTGACGAAAGAT
TATACGTTGTAACTATACCTGTTGAAAACGAATCTGTCGTTCTTGATCCAAAAAAAGAAAATTTTAAGAATCTAGACTCA
ATTCTGCAGAATCTAGAACAATTAAAATGTGATATGTATGATAATTCTTTGTTCCCTGTTGCGCTCGCAAATAAACTAGT
ATCCTTATCAGCGCATCCAAGTTCGGTAATACTTGAAAAATTTGCTAAAAGCTTCATAAAACCATAA

Upstream 100 bases:

>100_bases
ACAAGGGATTCATCAGAATGAAGACTTATTCGAATTCCTTTGTGGTACCAGTCCACATCGATCGATTTTTGGCTGATGAA
ATTGATTTAGAGGAATTAAG

Downstream 100 bases:

>100_bases
GACCAAAAGACTATGCTGAAAAATAAGTAGTAACAGTGAGTCATTGCCCATATAGAAAAACGAGTGCATCAATCTTTTTT
AGAAAAACAAAAAGAGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MSYSSQAGRRPNEYASKSSHTNIIWDQDIKEFLDKCSLPSGSDEIVLREENLIADVNYDLKSPISLFITIDGGYTEVFIR
REFPSCVLNFFQFGALIFELKDLKTLSNKPFIDPEDIERLKKIERLKFVLPTKNISYKDESLTNSVRNTFYEFFTENKEN
FIETLKWFLYREYDSKKEIASYTLSSCPNPKCNNKRIELNKRDMSENYLFCCDDCGEKIYLTDVFRLHEVIDDEFGAGGI
LAYVTNLLEHILLIHYIRTILRIKPSLLKETLFIKEGPLAFFSVTANMHKPMRDLSNYLLEKYDLNLVGVEKSGSFVEHA
AQIGNKMESGTLLLINNNYIYKYIIPGKADPDNPYARTSYYGGKLIFKSRDERLYVVTIPVENESVVLDPKKENFKNLDS
ILQNLEQLKCDMYDNSLFPVALANKLVSLSAHPSSVILEKFAKSFIKP

Sequences:

>Translated_448_residues
MSYSSQAGRRPNEYASKSSHTNIIWDQDIKEFLDKCSLPSGSDEIVLREENLIADVNYDLKSPISLFITIDGGYTEVFIR
REFPSCVLNFFQFGALIFELKDLKTLSNKPFIDPEDIERLKKIERLKFVLPTKNISYKDESLTNSVRNTFYEFFTENKEN
FIETLKWFLYREYDSKKEIASYTLSSCPNPKCNNKRIELNKRDMSENYLFCCDDCGEKIYLTDVFRLHEVIDDEFGAGGI
LAYVTNLLEHILLIHYIRTILRIKPSLLKETLFIKEGPLAFFSVTANMHKPMRDLSNYLLEKYDLNLVGVEKSGSFVEHA
AQIGNKMESGTLLLINNNYIYKYIIPGKADPDNPYARTSYYGGKLIFKSRDERLYVVTIPVENESVVLDPKKENFKNLDS
ILQNLEQLKCDMYDNSLFPVALANKLVSLSAHPSSVILEKFAKSFIKP
>Mature_447_residues
SYSSQAGRRPNEYASKSSHTNIIWDQDIKEFLDKCSLPSGSDEIVLREENLIADVNYDLKSPISLFITIDGGYTEVFIRR
EFPSCVLNFFQFGALIFELKDLKTLSNKPFIDPEDIERLKKIERLKFVLPTKNISYKDESLTNSVRNTFYEFFTENKENF
IETLKWFLYREYDSKKEIASYTLSSCPNPKCNNKRIELNKRDMSENYLFCCDDCGEKIYLTDVFRLHEVIDDEFGAGGIL
AYVTNLLEHILLIHYIRTILRIKPSLLKETLFIKEGPLAFFSVTANMHKPMRDLSNYLLEKYDLNLVGVEKSGSFVEHAA
QIGNKMESGTLLLINNNYIYKYIIPGKADPDNPYARTSYYGGKLIFKSRDERLYVVTIPVENESVVLDPKKENFKNLDSI
LQNLEQLKCDMYDNSLFPVALANKLVSLSAHPSSVILEKFAKSFIKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51764; Mature: 51633

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSSQAGRRPNEYASKSSHTNIIWDQDIKEFLDKCSLPSGSDEIVLREENLIADVNYDL
CCCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEECCCEEEECCCCC
KSPISLFITIDGGYTEVFIRREFPSCVLNFFQFGALIFELKDLKTLSNKPFIDPEDIERL
CCCEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KKIERLKFVLPTKNISYKDESLTNSVRNTFYEFFTENKENFIETLKWFLYREYDSKKEIA
HHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHH
SYTLSSCPNPKCNNKRIELNKRDMSENYLFCCDDCGEKIYLTDVFRLHEVIDDEFGAGGI
HHHHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHCCCCCCHH
LAYVTNLLEHILLIHYIRTILRIKPSLLKETLFIKEGPLAFFSVTANMHKPMRDLSNYLL
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEECCCEEEEEEECHHHHHHHHHHHHHH
EKYDLNLVGVEKSGSFVEHAAQIGNKMESGTLLLINNNYIYKYIIPGKADPDNPYARTSY
HHHCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCEE
YGGKLIFKSRDERLYVVTIPVENESVVLDPKKENFKNLDSILQNLEQLKCDMYDNSLFPV
CCCEEEEECCCCEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ALANKLVSLSAHPSSVILEKFAKSFIKP
HHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYSSQAGRRPNEYASKSSHTNIIWDQDIKEFLDKCSLPSGSDEIVLREENLIADVNYDL
CCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEECCCEEEECCCCC
KSPISLFITIDGGYTEVFIRREFPSCVLNFFQFGALIFELKDLKTLSNKPFIDPEDIERL
CCCEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KKIERLKFVLPTKNISYKDESLTNSVRNTFYEFFTENKENFIETLKWFLYREYDSKKEIA
HHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHH
SYTLSSCPNPKCNNKRIELNKRDMSENYLFCCDDCGEKIYLTDVFRLHEVIDDEFGAGGI
HHHHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHCCCCCCHH
LAYVTNLLEHILLIHYIRTILRIKPSLLKETLFIKEGPLAFFSVTANMHKPMRDLSNYLL
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEECCCEEEEEEECHHHHHHHHHHHHHH
EKYDLNLVGVEKSGSFVEHAAQIGNKMESGTLLLINNNYIYKYIIPGKADPDNPYARTSY
HHHCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCEE
YGGKLIFKSRDERLYVVTIPVENESVVLDPKKENFKNLDSILQNLEQLKCDMYDNSLFPV
CCCEEEEECCCCEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ALANKLVSLSAHPSSVILEKFAKSFIKP
HHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA