Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226294
Identifier: 21226294
GI number: 21226294
Start: 266170
End: 266589
Strand: Direct
Name: 21226294
Synonym: MM_0192
Alternate gene names: NA
Gene position: 266170-266589 (Clockwise)
Preceding gene: 21226292
Following gene: 21226295
Centisome position: 6.5
GC content: 33.33
Gene sequence:
>420_bases TTGGTTTTTTACGCAGGACTAAAACCTTACAATCAAAAAAAGGAAGAAGCAGCATTATATATTATTGGATATTTCACAGT TAAAGAAGTTATCGATTTTAACCTCTTGAGCACTGAAGAAAGAGAGAAGTATTGCAAGAGATGCAAAAATAATGCTCATA TAAAGAGAATGGAAATTTTAGGAGAAGAGCATCTTGATGATCTGGTCATAATTATGGGCCAAAAAAACGGGAGTAAATTA CTTGATAAAGCCATAAAGATCAGTGAGAAAGGCAGTGATTCTATAGGTAGAAATCTTCACGTAGTTTCTAAAAAAATGAG GCCAATTTTTGGATTCGAAGGCTCTATTCAGAGGAGCAGACCTAGGGAAGTAAAGGAAGAATATGTGGATAAATTGAAAA ACTTGCTTTTTGTAGAATAA
Upstream 100 bases:
>100_bases GTAGGTTGGGATGCATTTTGACCCTGAGTTTAAAACCTACACTTATGGAGATCCGACAAGTAAAAGAAGTTCTCTCCTGA GATTGCAAAAAAATGACTTA
Downstream 100 bases:
>100_bases GTTGGTTTACCTACTACTCAATTACTTTCTAAGGCTTTTTAATATTCTAAACTTTTTTGGCATCCCATTTTAATTTTCCT ACATATCCAGTACATTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MVFYAGLKPYNQKKEEAALYIIGYFTVKEVIDFNLLSTEEREKYCKRCKNNAHIKRMEILGEEHLDDLVIIMGQKNGSKL LDKAIKISEKGSDSIGRNLHVVSKKMRPIFGFEGSIQRSRPREVKEEYVDKLKNLLFVE
Sequences:
>Translated_139_residues MVFYAGLKPYNQKKEEAALYIIGYFTVKEVIDFNLLSTEEREKYCKRCKNNAHIKRMEILGEEHLDDLVIIMGQKNGSKL LDKAIKISEKGSDSIGRNLHVVSKKMRPIFGFEGSIQRSRPREVKEEYVDKLKNLLFVE >Mature_139_residues MVFYAGLKPYNQKKEEAALYIIGYFTVKEVIDFNLLSTEEREKYCKRCKNNAHIKRMEILGEEHLDDLVIIMGQKNGSKL LDKAIKISEKGSDSIGRNLHVVSKKMRPIFGFEGSIQRSRPREVKEEYVDKLKNLLFVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16170; Mature: 16170
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFYAGLKPYNQKKEEAALYIIGYFTVKEVIDFNLLSTEEREKYCKRCKNNAHIKRMEIL CEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHH GEEHLDDLVIIMGQKNGSKLLDKAIKISEKGSDSIGRNLHVVSKKMRPIFGFEGSIQRSR CHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC PREVKEEYVDKLKNLLFVE CHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVFYAGLKPYNQKKEEAALYIIGYFTVKEVIDFNLLSTEEREKYCKRCKNNAHIKRMEIL CEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHH GEEHLDDLVIIMGQKNGSKLLDKAIKISEKGSDSIGRNLHVVSKKMRPIFGFEGSIQRSR CHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC PREVKEEYVDKLKNLLFVE CHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA